Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0207 ATGGCCGCTAATTTCGCCACTTCCTTCTTCCATTTCTTCGTCTTCTTCATCATCCTTCTGTTAATCCATGGCGTTGCAGTTTCGGCCGATCCGCCATTGAAGACCTTCATCTTCCGTGTCAACCGTTTCTCCAAACCCTCCGTTTTCCCGACCCATTACCACTGGTACATTTCCCAGTTCGCCGAATCTCCCCAAATCCTCCATGTTTACGACACTGTCTTCCACGGCTTCTCTGCGTCTCTCACCCAAGAGCAAGTTGATTCCATCGGAAAACACCCTTCTGTCCTCGCCGTGTTCGAGGACCGTCGCCGGCGTCTTCACACCACGCGCTCCCCTCAGTTTCTCGGCCTGAGAAACCAGCGTGGTCTCTGGTCCGATTCCGATTATGGGTCGGATGTGATTATTGGGGTTTTTGATACTGGGATTTCCCCTGAACGGCGGAGCTTCTCCGATGTGAATTTGGGGCCAGTTCCTCGCCGGTGGAAAGGGGTTTGTCAGACCGGGACTAAATTCACGGAGAAGAACTGTAACAGGAAGATCGTTGGTGCGAGGTTTTTCTCTAAGGGTCATGAAGCGGGCAACAACGCTGCCGGTCCGGTTATTGGGATTAACGAAACGATTGAGTATCGATCTCCGAGAGACGCCGATGGGCATGGGACTCACACGGCGTCGACGGCGGCGGGGCGGCACTCGTTTCAGGCGAGTTTGGAGGGTTATGCTTCTGGGATTGCAAAAGGGGTTGCTCCTAAAGCGCGTTTGGCGGTTTACAAAGTTTGTTGGAAGAATTCGGGCTGTTTCGATTCGGATATTCTCGCGGCGTTTGATGCGGCGGTTAACGACGGCGTCGATGTCATTTCTATCTCGATTGGCGGCGGCGATGGCATTTCCTCGCCGTATTATCTCGACCCAATTGCAATCGGAGCATACGGCGCCGCTTCCAGAGGTGTTTTCGTTTCGTCTTCTGCTGGAAACGATGGGCCTAATGGAATGTCGGTGACGAATTTAGCGCCGTGGGTTACGACGGTCGGAGCAGGTACGATTGACCGGAATTTCCCGGCGGTGGTAACTCTGGGAAACGGACGGAAGATTTACGGCGTTTCGCTTTACGCCGGAGCTCCGTTGAACGGAACAATGTACCCGTTAGTTTACCCTGGGAAATCAGGGGTTCTCTCTGTTTCGCTCTGTATGGAAGATTCCCTCGATTCTAAGCTTGTGGCCGGAAAGATTGTTATCTGTGACCGGGGAAGTAATCCCAGAGTTGCGAAGGGTTTAGTTGTGAAGAAGGCCGGCGGCGTCGGAATGATTCTTGCTAACGGAATTTCCAACGGCGAAGGACTCGTCGGCGATGCCCATCTTCTTCCGGCCTGCGCAGTCGGCTCCGACGAAGGCGATTCCATGAAATCCTACGCATCGTCGTCTTCAAATCCCACAGCTACGATCGTCTTTCAGGGCACAATAGTCGGAATCAAACCGGCGCCGGTGGTGGCGTCGTTTTCTGCAAGAGGGCCAAATGGATTAAACCCAGAAATTCTGAAACCGGACTTGATCGCACCAGGTGTTAACATTCTAGCGGCTTGGACCGACGCCGTCGGTCCAACTGGTTTGGATTTCGATAAACGGAAAACAGAGTTCAATATCTTGTCCGGTACATCAATGGCGTGTCCTCATGTAAGTGGAGCCGCCGCTTTGTTGAAATCGGCTCACCCAGATTGGAGTCCGGCGGCGTTGAGATCCGCCATGATGACCACTGCAAGCATCACAGACAATCGACGGCAGCCGATGATTGAAGAATCCACCGGAAAAGCTTCCACGCCGTACGATTTCGGCGCAGGACATGTTAATCTTGGTCTAGCCATGGATCCCGGGCTAATCTTCGACATTACCAACACTGATTACGTCAATTTCCTATGCGCAATCGGCTACGGTGCAAAGATGATCCAGGTGATAACTCGAACGCCGGTGACATGTCCGGCGAAGAAGCCATTGCCGGAGAATCTGAATTACCCATCAATCGTTGCAGTATTTTCTACTCTATCTAGAGGGTGGTCGACAAAATCGTTTATCCGAACAGCGACAATTGTCGGCCCTGCGAATTCAGTGTACCGAGCCAAAATCGAAGCTCCGGAAGGGGTGACAGTGAAGGTAAAGCCGTCGAAACTGGTGTTCTCGGCGGCGGCGAAGAAACAGAGCTTCATAGTGAGTGTATCGGCCGACAACCAGAATCTGTCACTGGGCGATGTGGGTGCAGTTTTTGGTTGGCTTTCTTGGTCGGATGGAAAGCATGTGGTTCGAACCCCACTGGTTGTGACTCAATTGGAGCCGTTGTAA 2328 52.58 MAANFATSFFHFFVFFIILLLIHGVAVSADPPLKTFIFRVNRFSKPSVFPTHYHWYISQFAESPQILHVYDTVFHGFSASLTQEQVDSIGKHPSVLAVFEDRRRRLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPVPRRWKGVCQTGTKFTEKNCNRKIVGARFFSKGHEAGNNAAGPVIGINETIEYRSPRDADGHGTHTASTAAGRHSFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGAYGAASRGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPAVVTLGNGRKIYGVSLYAGAPLNGTMYPLVYPGKSGVLSVSLCMEDSLDSKLVAGKIVICDRGSNPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDSMKSYASSSSNPTATIVFQGTIVGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDKRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRRQPMIEESTGKASTPYDFGAGHVNLGLAMDPGLIFDITNTDYVNFLCAIGYGAKMIQVITRTPVTCPAKKPLPENLNYPSIVAVFSTLSRGWSTKSFIRTATIVGPANSVYRAKIEAPEGVTVKVKPSKLVFSAAAKKQSFIVSVSADNQNLSLGDVGAVFGWLSWSDGKHVVRTPLVVTQLEPL 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1663281 1666106 + Sed0009246.1 Sed01g0207 699511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0207 775 Gene3D - 636 772 - -
Sed01g0207 775 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Sed01g0207 775 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Sed01g0207 775 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Sed01g0207 775 FunFam subtilisin-like protease SBT1.5 348 487 - -
Sed01g0207 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Sed01g0207 775 FunFam Subtilisin-like protease SBT1.5 636 772 - -
Sed01g0207 775 CDD PA_subtilisin_like 354 480 - -
Sed01g0207 775 Pfam Subtilase family 130 597 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Sed01g0207 775 SUPERFAMILY PA domain 392 472 IPR046450 -
Sed01g0207 775 Pfam Fibronectin type-III domain 665 769 IPR041469 -
Sed01g0207 775 ProSiteProfiles Serine proteases, subtilase domain profile. 114 619 - -
Sed01g0207 775 Gene3D Peptidase S8/S53 domain 132 632 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed01g0207 775 CDD Peptidases_S8_3 106 585 IPR034197 -
Sed01g0207 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 107 IPR037045 -
Sed01g0207 775 SUPERFAMILY Subtilisin-like 106 623 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Sed01g0207 775 Gene3D - 348 487 - -
Sed01g0207 775 FunFam Subtilisin-like protease SBT1.5 132 361 - -
Sed01g0207 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 63 767 IPR045051 -
Sed01g0207 775 Pfam PA domain 379 465 IPR003137 -
Sed01g0207 775 Pfam Peptidase inhibitor I9 47 107 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0207 Sed-Chr1:1663281 Sed04g2379 Sed-Chr4:37174613 1.70E-237 dispersed
Sed01g0207 Sed-Chr1:1663281 Sed09g1717 Sed-Chr9:40408908 2.30E-242 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0207 - - - 0.0