Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed01g0207 | ATGGCCGCTAATTTCGCCACTTCCTTCTTCCATTTCTTCGTCTTCTTCATCATCCTTCTGTTAATCCATGGCGTTGCAGTTTCGGCCGATCCGCCATTGAAGACCTTCATCTTCCGTGTCAACCGTTTCTCCAAACCCTCCGTTTTCCCGACCCATTACCACTGGTACATTTCCCAGTTCGCCGAATCTCCCCAAATCCTCCATGTTTACGACACTGTCTTCCACGGCTTCTCTGCGTCTCTCACCCAAGAGCAAGTTGATTCCATCGGAAAACACCCTTCTGTCCTCGCCGTGTTCGAGGACCGTCGCCGGCGTCTTCACACCACGCGCTCCCCTCAGTTTCTCGGCCTGAGAAACCAGCGTGGTCTCTGGTCCGATTCCGATTATGGGTCGGATGTGATTATTGGGGTTTTTGATACTGGGATTTCCCCTGAACGGCGGAGCTTCTCCGATGTGAATTTGGGGCCAGTTCCTCGCCGGTGGAAAGGGGTTTGTCAGACCGGGACTAAATTCACGGAGAAGAACTGTAACAGGAAGATCGTTGGTGCGAGGTTTTTCTCTAAGGGTCATGAAGCGGGCAACAACGCTGCCGGTCCGGTTATTGGGATTAACGAAACGATTGAGTATCGATCTCCGAGAGACGCCGATGGGCATGGGACTCACACGGCGTCGACGGCGGCGGGGCGGCACTCGTTTCAGGCGAGTTTGGAGGGTTATGCTTCTGGGATTGCAAAAGGGGTTGCTCCTAAAGCGCGTTTGGCGGTTTACAAAGTTTGTTGGAAGAATTCGGGCTGTTTCGATTCGGATATTCTCGCGGCGTTTGATGCGGCGGTTAACGACGGCGTCGATGTCATTTCTATCTCGATTGGCGGCGGCGATGGCATTTCCTCGCCGTATTATCTCGACCCAATTGCAATCGGAGCATACGGCGCCGCTTCCAGAGGTGTTTTCGTTTCGTCTTCTGCTGGAAACGATGGGCCTAATGGAATGTCGGTGACGAATTTAGCGCCGTGGGTTACGACGGTCGGAGCAGGTACGATTGACCGGAATTTCCCGGCGGTGGTAACTCTGGGAAACGGACGGAAGATTTACGGCGTTTCGCTTTACGCCGGAGCTCCGTTGAACGGAACAATGTACCCGTTAGTTTACCCTGGGAAATCAGGGGTTCTCTCTGTTTCGCTCTGTATGGAAGATTCCCTCGATTCTAAGCTTGTGGCCGGAAAGATTGTTATCTGTGACCGGGGAAGTAATCCCAGAGTTGCGAAGGGTTTAGTTGTGAAGAAGGCCGGCGGCGTCGGAATGATTCTTGCTAACGGAATTTCCAACGGCGAAGGACTCGTCGGCGATGCCCATCTTCTTCCGGCCTGCGCAGTCGGCTCCGACGAAGGCGATTCCATGAAATCCTACGCATCGTCGTCTTCAAATCCCACAGCTACGATCGTCTTTCAGGGCACAATAGTCGGAATCAAACCGGCGCCGGTGGTGGCGTCGTTTTCTGCAAGAGGGCCAAATGGATTAAACCCAGAAATTCTGAAACCGGACTTGATCGCACCAGGTGTTAACATTCTAGCGGCTTGGACCGACGCCGTCGGTCCAACTGGTTTGGATTTCGATAAACGGAAAACAGAGTTCAATATCTTGTCCGGTACATCAATGGCGTGTCCTCATGTAAGTGGAGCCGCCGCTTTGTTGAAATCGGCTCACCCAGATTGGAGTCCGGCGGCGTTGAGATCCGCCATGATGACCACTGCAAGCATCACAGACAATCGACGGCAGCCGATGATTGAAGAATCCACCGGAAAAGCTTCCACGCCGTACGATTTCGGCGCAGGACATGTTAATCTTGGTCTAGCCATGGATCCCGGGCTAATCTTCGACATTACCAACACTGATTACGTCAATTTCCTATGCGCAATCGGCTACGGTGCAAAGATGATCCAGGTGATAACTCGAACGCCGGTGACATGTCCGGCGAAGAAGCCATTGCCGGAGAATCTGAATTACCCATCAATCGTTGCAGTATTTTCTACTCTATCTAGAGGGTGGTCGACAAAATCGTTTATCCGAACAGCGACAATTGTCGGCCCTGCGAATTCAGTGTACCGAGCCAAAATCGAAGCTCCGGAAGGGGTGACAGTGAAGGTAAAGCCGTCGAAACTGGTGTTCTCGGCGGCGGCGAAGAAACAGAGCTTCATAGTGAGTGTATCGGCCGACAACCAGAATCTGTCACTGGGCGATGTGGGTGCAGTTTTTGGTTGGCTTTCTTGGTCGGATGGAAAGCATGTGGTTCGAACCCCACTGGTTGTGACTCAATTGGAGCCGTTGTAA | 2328 | 52.58 | MAANFATSFFHFFVFFIILLLIHGVAVSADPPLKTFIFRVNRFSKPSVFPTHYHWYISQFAESPQILHVYDTVFHGFSASLTQEQVDSIGKHPSVLAVFEDRRRRLHTTRSPQFLGLRNQRGLWSDSDYGSDVIIGVFDTGISPERRSFSDVNLGPVPRRWKGVCQTGTKFTEKNCNRKIVGARFFSKGHEAGNNAAGPVIGINETIEYRSPRDADGHGTHTASTAAGRHSFQASLEGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGAYGAASRGVFVSSSAGNDGPNGMSVTNLAPWVTTVGAGTIDRNFPAVVTLGNGRKIYGVSLYAGAPLNGTMYPLVYPGKSGVLSVSLCMEDSLDSKLVAGKIVICDRGSNPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGSDEGDSMKSYASSSSNPTATIVFQGTIVGIKPAPVVASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLDFDKRKTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAALRSAMMTTASITDNRRQPMIEESTGKASTPYDFGAGHVNLGLAMDPGLIFDITNTDYVNFLCAIGYGAKMIQVITRTPVTCPAKKPLPENLNYPSIVAVFSTLSRGWSTKSFIRTATIVGPANSVYRAKIEAPEGVTVKVKPSKLVFSAAAKKQSFIVSVSADNQNLSLGDVGAVFGWLSWSDGKHVVRTPLVVTQLEPL | 775 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 1663281 | 1666106 | + | Sed0009246.1 | Sed01g0207 | 699511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed01g0207 | 775 | Gene3D | - | 636 | 772 | - | - | |
Sed01g0207 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 130 | 149 | IPR015500 | - | |
Sed01g0207 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 214 | 227 | IPR015500 | - | |
Sed01g0207 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 548 | 564 | IPR015500 | - | |
Sed01g0207 | 775 | FunFam | subtilisin-like protease SBT1.5 | 348 | 487 | - | - | |
Sed01g0207 | 775 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 549 | 559 | IPR023828 | - | |
Sed01g0207 | 775 | FunFam | Subtilisin-like protease SBT1.5 | 636 | 772 | - | - | |
Sed01g0207 | 775 | CDD | PA_subtilisin_like | 354 | 480 | - | - | |
Sed01g0207 | 775 | Pfam | Subtilase family | 130 | 597 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed01g0207 | 775 | SUPERFAMILY | PA domain | 392 | 472 | IPR046450 | - | |
Sed01g0207 | 775 | Pfam | Fibronectin type-III domain | 665 | 769 | IPR041469 | - | |
Sed01g0207 | 775 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 114 | 619 | - | - | |
Sed01g0207 | 775 | Gene3D | Peptidase S8/S53 domain | 132 | 632 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed01g0207 | 775 | CDD | Peptidases_S8_3 | 106 | 585 | IPR034197 | - | |
Sed01g0207 | 775 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 27 | 107 | IPR037045 | - | |
Sed01g0207 | 775 | SUPERFAMILY | Subtilisin-like | 106 | 623 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed01g0207 | 775 | Gene3D | - | 348 | 487 | - | - | |
Sed01g0207 | 775 | FunFam | Subtilisin-like protease SBT1.5 | 132 | 361 | - | - | |
Sed01g0207 | 775 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 63 | 767 | IPR045051 | - | |
Sed01g0207 | 775 | Pfam | PA domain | 379 | 465 | IPR003137 | - | |
Sed01g0207 | 775 | Pfam | Peptidase inhibitor I9 | 47 | 107 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g0207 | Sed-Chr1:1663281 | Sed04g2379 | Sed-Chr4:37174613 | 1.70E-237 | dispersed | |
Sed01g0207 | Sed-Chr1:1663281 | Sed09g1717 | Sed-Chr9:40408908 | 2.30E-242 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed01g0207 | - | - | - | 0.0 |