Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0345 ATGGCTTCCGACGAAATCGCACACAACTTCTCCCCAATGCTCATCGCATACAAAGACGGTCGAACCCACCGGCTCATGGGCACCGACCGGACCCCGCCCTCTCTCGACCCCCAAACCGGCGTCGTTTCCAAAGACGCCCTCATCTCCCCTGAACCGGTCTCCGCCCGGATCTACAAACCCAACTCCGCCGCCCCACAAAACCAGAAGCTTCCTCTCCTCATCTACTTCCACGGCGGCGGTTTCTGCGTCGAATCGGCGTTTTCCCCAACCTACCACCACCATCTTAACGCCCTAGTCGCCAAATCCAACATCCTCGCCGTCTCCGTCGATTACCGGTTGGCCCCGGAGCACCCGCTTCCGGCCGCTTATGAAGATTCGTGGGCTGCTCTAAAATGGGTCGCCGCCCATTTCGACGGAACCGGACCGGAGGAGTGGATTAACGAAATCGCGGATTTGGACCGGGTTTATTTCGCCGGAGATAGCGCCGGAGCGAACATCGCCCACCACATGGCCGTGCGGATCGGGGTGGAGGGTTTACCCGGGTTGAATCTGAGGGGGTTGATTTTGGTTCACCCTTGTTTCTGGGGAGGAAAATCGATCGGAGATGAAGATGAGCTGAATCCAATTCATAGAGAGGTGATTGAGAAGTTGTGGTATTTCGCTTGTCCTGCGATTAGCGGGTTGGACGACCCGGTTGTGAACCCGGAATTTGATCAGAAATTGGGGCGGGTTGCGGCGGAGAGAGTGGCGGTGTTTGTGGCGGAGACGGATGCATTGAAGAACAGAGGGTGGTTTTATAGTGAGTGTTTGAAGAAATCGGGATACGGCGGCGCCGTCGAGGTTGTGGAGACGAAGGGTCAAGGCCACGTGTTTCATTTGTTCGATCCCACTTCCGACGCGGCGGCGGAGTTCGTCGGGAAGCTTGCGGACTTCATTAATGGCGGTCCCGGCGAGTGA 957 57.26 MASDEIAHNFSPMLIAYKDGRTHRLMGTDRTPPSLDPQTGVVSKDALISPEPVSARIYKPNSAAPQNQKLPLLIYFHGGGFCVESAFSPTYHHHLNALVAKSNILAVSVDYRLAPEHPLPAAYEDSWAALKWVAAHFDGTGPEEWINEIADLDRVYFAGDSAGANIAHHMAVRIGVEGLPGLNLRGLILVHPCFWGGKSIGDEDELNPIHREVIEKLWYFACPAISGLDDPVVNPEFDQKLGRVAAERVAVFVAETDALKNRGWFYSECLKKSGYGGAVEVVETKGQGHVFHLFDPTSDAAAEFVGKLADFINGGPGE 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2595352 2596761 + Sed0014006.1 Sed01g0345 699649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0345 318 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 155 167 IPR033140 -
Sed01g0345 318 Pfam alpha/beta hydrolase fold 73 292 IPR013094 GO:0016787(InterPro)
Sed01g0345 318 PANTHER ARYLACETAMIDE DEACETYLASE 13 304 IPR050466 -
Sed01g0345 318 SUPERFAMILY alpha/beta-Hydrolases 5 313 IPR029058 -
Sed01g0345 318 Gene3D alpha/beta hydrolase 6 314 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0345 Sed-Chr1:2595352 Sed05g3662 Sed-Chr5:44812129 1.60E-136 dispersed
Sed01g0344 Sed-Chr1:2589958 Sed01g0345 Sed-Chr1:2595352 1.20E-35 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0345 - - - 0.0