Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed01g0369 | ATGGAGATGTGGTTCATCATCATCATCTCGCTCTGTATCTGCTCCCTTCTCAACGCCATTGTTACCCACTTTCGAAGCTCCAAACCAAAACTCCCACCAGGCCCACCTTCAATCCCAATCCTCTCCAACCTCCAATGGCTCCGCCGCGACCCTCTCCAAATCGAATCCCTCCTCCGCTCCCTCTTCGCCAAACACGGCCCCATCATCTCCCTCACTGTCGGCCGCCGCCCCGCCGTCTTCATCGCCGACCGCGCCGCCGCCCACGCCGCCCTCGTCCTCAACGGCGCCCTCTTCGCCGACCGCCCCCCGCCGCTCCCCGTCTCCAAAATCACCTCCAGCAACCAACACAACATCAACTCCGCCCCTTACGGCCCGCTCTGGCGCCTCCTCCGCCGGAATCTCACCTCCCAAATCCTCCATCCTTCCAGAGTCAAATCCTACTACCACGCTCGTAAGTGGGTTTTGGATGTTCTTCTCAATCGGATCGTTTCCCAGTCTCAATCGGGAAACCCCATTTCTGTAATCGATCATTTTCGGTATGCGGTGTTCTGTTTGTTGGCGTTGATGTGTTTTGGGGATAAACTCGATGAAACCCAGATTAAGGAAATTGAAAATGTCCAGCGCACGATGCTGGTGAATCTTGGGCGTTTCAACGTCCTCAATTTCTGGCCCAAATTGACCAAGATCTTCCTTAGAAAACGCTGGGAGAAGTTCCTCCAACTCAAAAGAAATCAAGGCAAAGTCCTAATTCCTCTGATCGAAGCAAGAAGAACAGCCCTCCAAAACAGAGCAAAAAACAGAGGAGAAGATGATGCAGAATTTGTGTTGTCATATGTGGATACCCTTCTCGATCTGGAGCTTCCGGACGAGAACCGGAAGCTTACCGATGACGAAATGGTCACCCTAGCCTCCGAGTTTCTCACTGCGGGCACCGACACGACGTCGACGGTGTTACAATGGATCATGGCGAATTTGGTGAAATACCCAGAAATTCAAAACAGAGTATATACAGAGATCAAAAAAGTAATGGGCAATTCAGGGAAGGAAAAAGTAAAGGAAGAAGATCTGGGGAAACTTCCATATCTGAAAGCTGTGGTGCTGGAAGGATTACGGAGACACCCGCCGGCGCATTTCGTGCTACCGCACGCCGTGAAAGAGGACACGAGATTGGGGAATTACGCGATACCGAAGAACGGAACGGTGAATTTCATGGTGGCGGAGATGGGTTGGGACCCAGAAGTGTGGGAGGATCCGATGGCGTTTAAGCCGGAAAGGTTCGTGAAAGAAGATGAAGAAATTGAGTTTGATTTTGATTTCGACATAACAGGGACCAAAGGGATAAAGATGATCCCGTTTGGAGCTGGGAGAAGGATCTGTCCAGGATTCAATTTGGCGATTCTTCATTTGGAGTATTTTATTGCGAATTTGGTTTGGAGATTTGAATGGAAAGCTGTGGATGGAGATGAAGTTGATCTGTCGGAGAAGATGGAGTTTACCGTTGTGATGGAAAAGCCTCTCAAAGCCAACATAATTTCCAGGTCTTAA | 1545 | 50.23 | MEMWFIIIISLCICSLLNAIVTHFRSSKPKLPPGPPSIPILSNLQWLRRDPLQIESLLRSLFAKHGPIISLTVGRRPAVFIADRAAAHAALVLNGALFADRPPPLPVSKITSSNQHNINSAPYGPLWRLLRRNLTSQILHPSRVKSYYHARKWVLDVLLNRIVSQSQSGNPISVIDHFRYAVFCLLALMCFGDKLDETQIKEIENVQRTMLVNLGRFNVLNFWPKLTKIFLRKRWEKFLQLKRNQGKVLIPLIEARRTALQNRAKNRGEDDAEFVLSYVDTLLDLELPDENRKLTDDEMVTLASEFLTAGTDTTSTVLQWIMANLVKYPEIQNRVYTEIKKVMGNSGKEKVKEEDLGKLPYLKAVVLEGLRRHPPAHFVLPHAVKEDTRLGNYAIPKNGTVNFMVAEMGWDPEVWEDPMAFKPERFVKEDEEIEFDFDFDITGTKGIKMIPFGAGRRICPGFNLAILHLEYFIANLVWRFEWKAVDGDEVDLSEKMEFTVVMEKPLKANIISRS | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 2816392 | 2818133 | + | Sed0008544.1 | Sed01g0369 | 699673 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed01g0369 | 514 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 10 | 510 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Sed01g0369 | 514 | Pfam | Cytochrome P450 | 32 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | SUPERFAMILY | Cytochrome P450 | 32 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | Gene3D | Cytochrome P450 | 24 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed01g0369 | 514 | CDD | CYP77_89 | 64 | 507 | - | - | |
| Sed01g0369 | 514 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 404 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed01g0369 | 514 | FunFam | Cytochrome P450 family protein | 25 | 514 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed01g0369 | Sed-Chr1:2816392 | Sed05g3709 | Sed-Chr5:45105012 | 9.40E-115 | dispersed | |
| Sed01g0369 | Sed-Chr1:2816392 | Sed01g0370 | Sed-Chr1:2821828 | 2.60E-237 | tandem | |
| Sed05g3693 | Sed-Chr5:44989251 | Sed01g0369 | Sed-Chr1:2816392 | 1.30E-108 | transposed | |
| Sed10g0618 | Sed-Chr10:4117234 | Sed01g0369 | Sed-Chr1:2816392 | 3.40E-96 | transposed | |
| Sed12g1818 | Sed-Chr12:29404566 | Sed01g0369 | Sed-Chr1:2816392 | 9.40E-147 | transposed | |
| Sed01g0369 | Sed-Chr1:2816392 | Sed05g3692 | Sed-Chr5:44986376 | 2.90E-13 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed01g0369 | K24184 | - | csv:101204559 | 773.467 |