Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0369 ATGGAGATGTGGTTCATCATCATCATCTCGCTCTGTATCTGCTCCCTTCTCAACGCCATTGTTACCCACTTTCGAAGCTCCAAACCAAAACTCCCACCAGGCCCACCTTCAATCCCAATCCTCTCCAACCTCCAATGGCTCCGCCGCGACCCTCTCCAAATCGAATCCCTCCTCCGCTCCCTCTTCGCCAAACACGGCCCCATCATCTCCCTCACTGTCGGCCGCCGCCCCGCCGTCTTCATCGCCGACCGCGCCGCCGCCCACGCCGCCCTCGTCCTCAACGGCGCCCTCTTCGCCGACCGCCCCCCGCCGCTCCCCGTCTCCAAAATCACCTCCAGCAACCAACACAACATCAACTCCGCCCCTTACGGCCCGCTCTGGCGCCTCCTCCGCCGGAATCTCACCTCCCAAATCCTCCATCCTTCCAGAGTCAAATCCTACTACCACGCTCGTAAGTGGGTTTTGGATGTTCTTCTCAATCGGATCGTTTCCCAGTCTCAATCGGGAAACCCCATTTCTGTAATCGATCATTTTCGGTATGCGGTGTTCTGTTTGTTGGCGTTGATGTGTTTTGGGGATAAACTCGATGAAACCCAGATTAAGGAAATTGAAAATGTCCAGCGCACGATGCTGGTGAATCTTGGGCGTTTCAACGTCCTCAATTTCTGGCCCAAATTGACCAAGATCTTCCTTAGAAAACGCTGGGAGAAGTTCCTCCAACTCAAAAGAAATCAAGGCAAAGTCCTAATTCCTCTGATCGAAGCAAGAAGAACAGCCCTCCAAAACAGAGCAAAAAACAGAGGAGAAGATGATGCAGAATTTGTGTTGTCATATGTGGATACCCTTCTCGATCTGGAGCTTCCGGACGAGAACCGGAAGCTTACCGATGACGAAATGGTCACCCTAGCCTCCGAGTTTCTCACTGCGGGCACCGACACGACGTCGACGGTGTTACAATGGATCATGGCGAATTTGGTGAAATACCCAGAAATTCAAAACAGAGTATATACAGAGATCAAAAAAGTAATGGGCAATTCAGGGAAGGAAAAAGTAAAGGAAGAAGATCTGGGGAAACTTCCATATCTGAAAGCTGTGGTGCTGGAAGGATTACGGAGACACCCGCCGGCGCATTTCGTGCTACCGCACGCCGTGAAAGAGGACACGAGATTGGGGAATTACGCGATACCGAAGAACGGAACGGTGAATTTCATGGTGGCGGAGATGGGTTGGGACCCAGAAGTGTGGGAGGATCCGATGGCGTTTAAGCCGGAAAGGTTCGTGAAAGAAGATGAAGAAATTGAGTTTGATTTTGATTTCGACATAACAGGGACCAAAGGGATAAAGATGATCCCGTTTGGAGCTGGGAGAAGGATCTGTCCAGGATTCAATTTGGCGATTCTTCATTTGGAGTATTTTATTGCGAATTTGGTTTGGAGATTTGAATGGAAAGCTGTGGATGGAGATGAAGTTGATCTGTCGGAGAAGATGGAGTTTACCGTTGTGATGGAAAAGCCTCTCAAAGCCAACATAATTTCCAGGTCTTAA 1545 50.23 MEMWFIIIISLCICSLLNAIVTHFRSSKPKLPPGPPSIPILSNLQWLRRDPLQIESLLRSLFAKHGPIISLTVGRRPAVFIADRAAAHAALVLNGALFADRPPPLPVSKITSSNQHNINSAPYGPLWRLLRRNLTSQILHPSRVKSYYHARKWVLDVLLNRIVSQSQSGNPISVIDHFRYAVFCLLALMCFGDKLDETQIKEIENVQRTMLVNLGRFNVLNFWPKLTKIFLRKRWEKFLQLKRNQGKVLIPLIEARRTALQNRAKNRGEDDAEFVLSYVDTLLDLELPDENRKLTDDEMVTLASEFLTAGTDTTSTVLQWIMANLVKYPEIQNRVYTEIKKVMGNSGKEKVKEEDLGKLPYLKAVVLEGLRRHPPAHFVLPHAVKEDTRLGNYAIPKNGTVNFMVAEMGWDPEVWEDPMAFKPERFVKEDEEIEFDFDFDITGTKGIKMIPFGAGRRICPGFNLAILHLEYFIANLVWRFEWKAVDGDEVDLSEKMEFTVVMEKPLKANIISRS 514
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 2816392 2818133 + Sed0008544.1 Sed01g0369 699673
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0369 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 510 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Sed01g0369 514 Pfam Cytochrome P450 32 505 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 SUPERFAMILY Cytochrome P450 32 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 Gene3D Cytochrome P450 24 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed01g0369 514 CDD CYP77_89 64 507 - -
Sed01g0369 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0369 514 FunFam Cytochrome P450 family protein 25 514 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0369 Sed-Chr1:2816392 Sed05g3709 Sed-Chr5:45105012 9.40E-115 dispersed
Sed01g0369 Sed-Chr1:2816392 Sed01g0370 Sed-Chr1:2821828 2.60E-237 tandem
Sed05g3693 Sed-Chr5:44989251 Sed01g0369 Sed-Chr1:2816392 1.30E-108 transposed
Sed10g0618 Sed-Chr10:4117234 Sed01g0369 Sed-Chr1:2816392 3.40E-96 transposed
Sed12g1818 Sed-Chr12:29404566 Sed01g0369 Sed-Chr1:2816392 9.40E-147 transposed
Sed01g0369 Sed-Chr1:2816392 Sed05g3692 Sed-Chr5:44986376 2.90E-13 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0369 K24184 - csv:101204559 773.467