Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed01g0370 | ATGGAGATTTGGTTCATCATCATCATCTCGCTCTGTATCTGCTCCCTTCTCAACGCCATTGTTACCCACTTTCGAAGCTCCTCCGCAAACAAACTCCCACCAGGCCCACCTTCAATCCCAATCCTCTCAAACCTCCAATGGCTCCGCCGCTCCTCTCTCCAAATCGAATCCCTCCTCCGCCGTTACGCCGCCGTGTACGGCCCCATCCTCACCCTCCAAATCGCCGACCGCCCCGCCATCTTCATCGCCAACCGCTCCGCCGCCCACGCTGCCCTCCTACTCAACGGCGCCCTCTTCGCCGACCGTCCGCCGCCGACCCCCACCGGGAAAATCGTCACCTGCAACCAGCACAACATCAGCTCCGCCGCCTACGGCCCACTCTGGCGTCTCCTCCGCCGCAACCTTACCTCCCAAATCCTCCACCCTTCCCGTGTTAAATCGTTTAATCGAGCTCGGAAATGGGTTTTGGATATTCTTCTCGGTCGTCTTCTCCCTCACTCTGAATCTGAATCTCCCGTTCTCATCGTCGATCATTTTCAGTACGCCATGTTCTGTTTGCTTGTGCTCATGTGCTTTGGTGACAAACTCGACGAATCCCAGATTCGAGAAATCGAAAACGTTCATCGAGCTTTTCTGTTGAGTTTTGGGCGTTTCAATATACTGAACTTCTGGCCGAAATTGACGAAGATTTTCCTCAGAAAACACTGGGCTGAGTTTCTTCAACTCAGGAGTAATCAGGAAAAAGTCGTCATCCCTTTAATCCAAGCAAAACAAAAAGCCAAACGAAACAGAGCAAACAGAGAAGAAAACAGAGCAGAAACAGAGCAAGAATCTACAGTCTCATATGTAGATACCCTTTTGGAATTGGATCTCCCAGAAGAGAACAGAAAGCTTACAGATGAGGAAATGGTAGCCATATGCTCGGAGTTTCTCAATGCCGGGACCGACACAACGTCGACGTCGTTACAATGGATCATGGCGAATTTGGTAAAATACCCAGAAATTCAAAACAGAGTATATACAGAGATCAAAAAAGTAATGGGCAATTCAGGGGAGGAAGAAGTAAAGGAAGAAGACCTGGGGAAACTTCCATATCTGAAAGCTGTGGTGCTGGAAGGATTACGAAGGCACCCGCCGGGGCATTTCGTGCTACCGCACGCAGTGAAAGAGGATACGAAATTAGGGAATTACGTGATACCGAAGAACGGAACGGTGAATTTCATGGTGGCGGAGATGGGTTGGGACCCAGAAGTGTGGGAGGATCCGATGGCGTTTAAGCCGGAAAGATTCATGAAAGAAGGGGAAGAAATTGGGGTTGATTTTGACATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTTGGAGCTGGGAGAAGAATGTGCCCTGGATTCGGATTGGCGATTCTTCATTTGGAGTATTTTATTGCGAATTTGGTTTGGAGATTTGAATGGAAAGCTGTGGATGGAGATGAAGTTGATCTGTCGGAGAAGGTGGAGTTTACCGTTGTGATGGAAAAGCCTCTCAAAGCTAACATCATTTCCAGGTGA | 1548 | 49.1 | MEIWFIIIISLCICSLLNAIVTHFRSSSANKLPPGPPSIPILSNLQWLRRSSLQIESLLRRYAAVYGPILTLQIADRPAIFIANRSAAHAALLLNGALFADRPPPTPTGKIVTCNQHNISSAAYGPLWRLLRRNLTSQILHPSRVKSFNRARKWVLDILLGRLLPHSESESPVLIVDHFQYAMFCLLVLMCFGDKLDESQIREIENVHRAFLLSFGRFNILNFWPKLTKIFLRKHWAEFLQLRSNQEKVVIPLIQAKQKAKRNRANREENRAETEQESTVSYVDTLLELDLPEENRKLTDEEMVAICSEFLNAGTDTTSTSLQWIMANLVKYPEIQNRVYTEIKKVMGNSGEEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTKLGNYVIPKNGTVNFMVAEMGWDPEVWEDPMAFKPERFMKEGEEIGVDFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFIANLVWRFEWKAVDGDEVDLSEKVEFTVVMEKPLKANIISR | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2821828 | 2823375 | + | Sed0027369.1 | Sed01g0370 | 699674 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed01g0370 | 515 | Gene3D | Cytochrome P450 | 26 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | CDD | CYP77_89 | 66 | 509 | - | - | |
Sed01g0370 | 515 | FunFam | Cytochrome P450 family protein | 26 | 515 | - | - | |
Sed01g0370 | 515 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Sed01g0370 | 515 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 11 | 512 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
Sed01g0370 | 515 | Pfam | Cytochrome P450 | 33 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | E-class P450 group I signature | 408 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | SUPERFAMILY | Cytochrome P450 | 33 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | Coils | Coil | 255 | 277 | - | - | |
Sed01g0370 | 515 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed01g0370 | 515 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g0370 | Sed-Chr1:2821828 | Sed12g1818 | Sed-Chr12:29404566 | 1.70E-151 | dispersed | |
Sed05g3692 | Sed-Chr5:44986376 | Sed01g0370 | Sed-Chr1:2821828 | 3.80E-13 | dispersed | |
Sed01g0369 | Sed-Chr1:2816392 | Sed01g0370 | Sed-Chr1:2821828 | 2.60E-237 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed01g0370 | K24184 | - | csv:101204559 | 763.066 |