Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0370 ATGGAGATTTGGTTCATCATCATCATCTCGCTCTGTATCTGCTCCCTTCTCAACGCCATTGTTACCCACTTTCGAAGCTCCTCCGCAAACAAACTCCCACCAGGCCCACCTTCAATCCCAATCCTCTCAAACCTCCAATGGCTCCGCCGCTCCTCTCTCCAAATCGAATCCCTCCTCCGCCGTTACGCCGCCGTGTACGGCCCCATCCTCACCCTCCAAATCGCCGACCGCCCCGCCATCTTCATCGCCAACCGCTCCGCCGCCCACGCTGCCCTCCTACTCAACGGCGCCCTCTTCGCCGACCGTCCGCCGCCGACCCCCACCGGGAAAATCGTCACCTGCAACCAGCACAACATCAGCTCCGCCGCCTACGGCCCACTCTGGCGTCTCCTCCGCCGCAACCTTACCTCCCAAATCCTCCACCCTTCCCGTGTTAAATCGTTTAATCGAGCTCGGAAATGGGTTTTGGATATTCTTCTCGGTCGTCTTCTCCCTCACTCTGAATCTGAATCTCCCGTTCTCATCGTCGATCATTTTCAGTACGCCATGTTCTGTTTGCTTGTGCTCATGTGCTTTGGTGACAAACTCGACGAATCCCAGATTCGAGAAATCGAAAACGTTCATCGAGCTTTTCTGTTGAGTTTTGGGCGTTTCAATATACTGAACTTCTGGCCGAAATTGACGAAGATTTTCCTCAGAAAACACTGGGCTGAGTTTCTTCAACTCAGGAGTAATCAGGAAAAAGTCGTCATCCCTTTAATCCAAGCAAAACAAAAAGCCAAACGAAACAGAGCAAACAGAGAAGAAAACAGAGCAGAAACAGAGCAAGAATCTACAGTCTCATATGTAGATACCCTTTTGGAATTGGATCTCCCAGAAGAGAACAGAAAGCTTACAGATGAGGAAATGGTAGCCATATGCTCGGAGTTTCTCAATGCCGGGACCGACACAACGTCGACGTCGTTACAATGGATCATGGCGAATTTGGTAAAATACCCAGAAATTCAAAACAGAGTATATACAGAGATCAAAAAAGTAATGGGCAATTCAGGGGAGGAAGAAGTAAAGGAAGAAGACCTGGGGAAACTTCCATATCTGAAAGCTGTGGTGCTGGAAGGATTACGAAGGCACCCGCCGGGGCATTTCGTGCTACCGCACGCAGTGAAAGAGGATACGAAATTAGGGAATTACGTGATACCGAAGAACGGAACGGTGAATTTCATGGTGGCGGAGATGGGTTGGGACCCAGAAGTGTGGGAGGATCCGATGGCGTTTAAGCCGGAAAGATTCATGAAAGAAGGGGAAGAAATTGGGGTTGATTTTGACATAACAGGGAGCAAGGAGATAAAGATGATGCCGTTTGGAGCTGGGAGAAGAATGTGCCCTGGATTCGGATTGGCGATTCTTCATTTGGAGTATTTTATTGCGAATTTGGTTTGGAGATTTGAATGGAAAGCTGTGGATGGAGATGAAGTTGATCTGTCGGAGAAGGTGGAGTTTACCGTTGTGATGGAAAAGCCTCTCAAAGCTAACATCATTTCCAGGTGA 1548 49.1 MEIWFIIIISLCICSLLNAIVTHFRSSSANKLPPGPPSIPILSNLQWLRRSSLQIESLLRRYAAVYGPILTLQIADRPAIFIANRSAAHAALLLNGALFADRPPPTPTGKIVTCNQHNISSAAYGPLWRLLRRNLTSQILHPSRVKSFNRARKWVLDILLGRLLPHSESESPVLIVDHFQYAMFCLLVLMCFGDKLDESQIREIENVHRAFLLSFGRFNILNFWPKLTKIFLRKHWAEFLQLRSNQEKVVIPLIQAKQKAKRNRANREENRAETEQESTVSYVDTLLELDLPEENRKLTDEEMVAICSEFLNAGTDTTSTSLQWIMANLVKYPEIQNRVYTEIKKVMGNSGEEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTKLGNYVIPKNGTVNFMVAEMGWDPEVWEDPMAFKPERFMKEGEEIGVDFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFIANLVWRFEWKAVDGDEVDLSEKVEFTVVMEKPLKANIISR 515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 2821828 2823375 + Sed0027369.1 Sed01g0370 699674
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0370 515 Gene3D Cytochrome P450 26 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 CDD CYP77_89 66 509 - -
Sed01g0370 515 FunFam Cytochrome P450 family protein 26 515 - -
Sed01g0370 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed01g0370 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 512 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Sed01g0370 515 Pfam Cytochrome P450 33 506 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 SUPERFAMILY Cytochrome P450 33 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 Coils Coil 255 277 - -
Sed01g0370 515 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g0370 515 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0370 Sed-Chr1:2821828 Sed12g1818 Sed-Chr12:29404566 1.70E-151 dispersed
Sed05g3692 Sed-Chr5:44986376 Sed01g0370 Sed-Chr1:2821828 3.80E-13 dispersed
Sed01g0369 Sed-Chr1:2816392 Sed01g0370 Sed-Chr1:2821828 2.60E-237 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0370 K24184 - csv:101204559 763.066