Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0770 ATGAGGGTTATGGGCGTCAAGGGCTTAACCCTCTACCATCTCAAGAGCCATCTTCAGAAATTCAGGCTGGGAAAGCAACCCCACAAGGAATTCAATGAACAATCAATAAAGGATGGTTTGAGAGCTTCAGCCTTAGAAAGAAACAGTGGATCTTCTTCCAGCTTAATGGATCGTAGCATGAACGAGATGCAAATGGAAGTCCAGAGACGACTGCATGAACAAATTGAGGTACAAAGACACCTCCAATTGAGGATTGAGGCTCAAGGCAAATACATGCAAAGCATATTGGAGAAAGCTTGCCAAACCCTCGCAGGAGAGAACATGTCCGCCGCCACTTCCGCCGCCGCCGCCGGACCTTTCAAAACCACTTCCAACAATATTGGAACAACCACCACAGCCATCAAAGACTTCATTTCACCTCCTCCTCCTCACACCTTCCCTCCTTTTCAAGATATCAACAACCTATTTACCTGCGAACCGCTGCTCCCGCCTCCCGTCGACTGCCTCAAGAAGCCCAGCCCCTTCATCTCCGGTGCCGGCAAGGCCCCTATTTTCTGGCCAGACGATCTTCGGCTCCAGGACTTAGGGACCCCTCCAGCCACACGAGCACCAACACCGCCATTGATAGAATTTGACCCTCTTCAATTGGAAATGTATGGAACTAGGTCACCGCTGCTCGCCATTCGCAATGATGAGAAGAAGTTCGATGTGTCGTTAAAGCTCGAGAGGCCATCACCACGACATTCGGATGAGAGGGTGAATTGTGATATGGCTAACAATAACAACCCTAAGATGTCACAGCCACAGGGAAGAAATAATTCTTCATTTGGTTAA 834 48.92 MRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSIKDGLRASALERNSGSSSSLMDRSMNEMQMEVQRRLHEQIEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMSAATSAAAAGPFKTTSNNIGTTTTAIKDFISPPPPHTFPPFQDINNLFTCEPLLPPPVDCLKKPSPFISGAGKAPIFWPDDLRLQDLGTPPATRAPTPPLIEFDPLQLEMYGTRSPLLAIRNDEKKFDVSLKLERPSPRHSDERVNCDMANNNNPKMSQPQGRNNSSFG 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5741691 5744658 + Sed0015076.2 Sed01g0770 700074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0770 277 Gene3D - 1 26 - -
Sed01g0770 277 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 126 IPR046955 GO:0003700(InterPro)
Sed01g0770 277 MobiDBLite consensus disorder prediction 241 277 - -
Sed01g0770 277 MobiDBLite consensus disorder prediction 255 277 - -
Sed01g0770 277 Pfam MYB-CC type transfactor, LHEQLE motif 63 102 IPR025756 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0770 Sed-Chr1:5741691 Sed05g3314 Sed-Chr5:42487955 1.20E-92 dispersed
Sed01g0769 Sed-Chr1:5741349 Sed01g0770 Sed-Chr1:5741691 1.90E-143 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0770 - - - 0.0