Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0967 ATGGGTACAGAAACCCCCAACCGGGTCGGATCCGAATCCATCGGCGCGGCCCGATTCGCCGTCCAGGTCATCACAGGGCGGTGGTTCACGGTGTTCGCCACCTTTCTCATCATGGCCGGCGCCGGCGCCACCTACCTGTTCGGCGTCTACTCCAAAGAGATAAAAAAAACGCTCGGCTACGATCAGACCACGCTGAATCTGATGGGTTTCTTCAAAGATACCGGCGCCAACGTCGGCGTGCTCTCCGGCTTGGTGGCGGAGGTGACGCCGACTTGGTTCGTCCTCCTCCTCGGCTCCGCCCTGAACTTCGGCGGCTACTTCATGATCTGGCTCGCCGTCACCGGCCGGATCGCCAAGCCGGCGGTCTGGCAGATGTGTCTCTACATTTGCGTCGGCGCCAATTCCCAGAACTTCGCCAACACCGGCGCTCTGGTCACATGCATCGAGAACTTCCCGGAGAGCCGCGGCGCCATGATGGGGCTTTTGAAGGGCTTCACCGGCTTGAGCGGCGCCATTTTCACTCAGATTTATCTAGCCGTTTACGGCGACGACGCCAAGTCTTTGATCCTCCTCATCGGCTGGCTCCCGGCGGCGATCTCTGTTTTGTTCGTTTTCACCATTCGAAGGTTGAAACCGGCGAAACAGAGCCGCAACGAGAATAGGGTTTTTTACCATTTTCTTTACGTCTCAATTGGGTTAGCCATTTTCATCATGGTTATGAACATTGTTCAGAAGAAAATCGAGTTCAATCGAACCGCTTACGCCATTAGCGCCACCGTCTGTTGCGTTTTCCTCTTCCTTCCTCTGTTCATTGTAATCAGAGAAGAATTGCATTTATTGAATTTGAAGAAATACCCACCAATCCCAATCGAAAACCCACAATCAGAATCTCATAAAAAACCAGTTCCACCCAAAATTGAAGAAGAAATTAAGGAAATCGAAGAGAAATCAAACCCACCGCCGGCGTCCTGTTTCTCAAACATATGCGAAAAGCCAGCCAGAGGAGACGATTACACGATCCTCCAAGCACTGTTAAGCATCGACATGCTCGTTCTGTTCATCGCAACATTCTGTGGGCTCGGCACAAGCTTAACCGCCGTCGACAACTTGGGCCAGATCGGAGAATCGCTCGGATACCCATTAAAGACAGTGAGCTCCTTCGTTTCATTAGTCAGCATTTGGAATTACTTCGGCAGAGTCTTCGCCGGATTCGTATCGGAATCTCTCCTCGCAAGGTACAAATTCCCAAGACCACTAATGATGACAATCGTTCTTCTTCTCTCTTGCATCGGCCAAATCTCAATCGCATTCCCATTTCCGGGATCGGTGTACATAGCGTCGGTGATCATCGGATTCTCCTTCGGCGCGCAACTTCCTCTGCTTTTCGCCATAATTTCAGAGCTTTTCGGGCTGAAGTATTTCTCGACTCTGTTCAACTTCGGGCAGATCGCGAGCCCGTTGGGGTCGTACATTCTGAACGTGAAGGTGGCCGGAATGATGTACGACGTCGAGGCGTTGAAGCAGCTGAAGGAGAAGGGGCTGGACCGGTCGGCGGTGAAGGAATTGACCTGCATCGGAAAACAGTGTTACCGGAAATCGTTTGCGTTAATGGCGATTGTGACCTTTGTTGGGGCAATGATTTCGCTGATTTTGGTGGCGAGGACGAAGGAATTTTACAGAGGGGATATTTACAAGAAGTTTAGAGATGAAGTGAACGACGAAACTGGTGAATCCAAGTGA 1740 51.49 MGTETPNRVGSESIGAARFAVQVITGRWFTVFATFLIMAGAGATYLFGVYSKEIKKTLGYDQTTLNLMGFFKDTGANVGVLSGLVAEVTPTWFVLLLGSALNFGGYFMIWLAVTGRIAKPAVWQMCLYICVGANSQNFANTGALVTCIENFPESRGAMMGLLKGFTGLSGAIFTQIYLAVYGDDAKSLILLIGWLPAAISVLFVFTIRRLKPAKQSRNENRVFYHFLYVSIGLAIFIMVMNIVQKKIEFNRTAYAISATVCCVFLFLPLFIVIREELHLLNLKKYPPIPIENPQSESHKKPVPPKIEEEIKEIEEKSNPPPASCFSNICEKPARGDDYTILQALLSIDMLVLFIATFCGLGTSLTAVDNLGQIGESLGYPLKTVSSFVSLVSIWNYFGRVFAGFVSESLLARYKFPRPLMMTIVLLLSCIGQISIAFPFPGSVYIASVIIGFSFGAQLPLLFAIISELFGLKYFSTLFNFGQIASPLGSYILNVKVAGMMYDVEALKQLKEKGLDRSAVKELTCIGKQCYRKSFALMAIVTFVGAMISLILVARTKEFYRGDIYKKFRDEVNDETGESK 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7187661 7189568 + Sed0008461.1 Sed01g0967 700271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0967 579 CDD MFS_Mch1p_like 26 545 - -
Sed01g0967 579 FunFam Nodulin family protein 340 561 - -
Sed01g0967 579 SUPERFAMILY MFS general substrate transporter 29 559 IPR036259 -
Sed01g0967 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 26 568 - GO:0016020(PANTHER)
Sed01g0967 579 Pfam Nodulin-like 27 273 IPR010658 -
Sed01g0967 579 Gene3D MFS general substrate transporter like domains 344 560 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0967 Sed-Chr1:7187661 Sed06g2020 Sed-Chr6:44310356 3.70E-192 dispersed
Sed01g0967 Sed-Chr1:7187661 Sed01g0968 Sed-Chr1:7195340 6.40E-152 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0967 - - - 0.0