Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0968 ATGGACGAGAACAAAGCAGTAAAAAACTGGCAGTTCGTGAAACAAGTTGTCAATGGGCGATGGTTTATGGTATTCACCTCGTTTCTAATCATGATTGGCACAGGTTCCACTTACTTATTTGGAACATACTCTAAAGTCCTCAAAACACAATTTGATTACACTCAAACCCAAATTAATACCTTGGGATTTGCCAAAGATCTCGGTGCCAACCTCGGAATTATAGCCGGGCTTCTCGCCGAGGTGGCGCCAGCGTGGGTTCTATTCCTTTTGGGTTCAACCTCAAATTTCCTAAGCTACTTTATAATATGGCTCTTTATTACAGGCCACATCCCTAAGCCCCAACTGTGGCACATGTTCCTTTTCATTTGCATCTCTGCAAATTCTCAAAACTTCCCAAACACTGCCATTATGGTTACAAACGTCAGAAACTTCCCCGACCATCGCGGAATCATCTTGGGTCTTCTCAAGGGCTTTGTCGGCCTCGGCGGTGCTGTTTTGACCCAAATTTATTTAGCCATTTACGGCCACGAAAACCCATCTAACCTTGTTCTTCTTCTTTCATGGCTTCCCTCCATTGTTGCTTTGCTTTTTTTCCATTCAATTCGAACAATTCAAGCCCGAAAACACCCACATGAGCTCAATGTGTTTTACCATCTGCTTTCTGTCTCCATAACAATGGCGGTCTTCATCTTGTTCCTCACCATTACTCAAAAACAAATTGTTTTCTCCCACGCTGGCTACGTCGGTGGTGTTGCCGTCGTAATAGCCTTACTCTGTCTTCCTTTGCTCATCGCAATCAAAAAAGAGTTGTTCCTTTTCAAACTCAACAAACAAAAAATTGATCAATCTGTTTCTGTATCGATTCCAGAAACAATTGTAGAAACTTCTCAACCTACTACACAAAATGTGCGTTGCAACAAGCCGCAAAGAGGGGAAGATTTCAGCATCTTACAAGCTTTATTGAGCAAAGACATGGCTTTGATTTTCATCGCAACGGTTAGTGGATGCGGTTCGTCGGTTGCCGCCATCGACAACCTCGGACAAATAGCGGAATCACTCAGATACCCAGCTCAACATATAAACGTCTTCGTTTCGTGGCTTTCCATTTTCAATTTCTTCGGTCGGGTGTCCTCGGGTTTCATCTCCGAAACCATGATGATAAAATACAAGCTCCCCCGTCCTCTAATGTTCGGATTCACCCAACTCCTCATCTGCCTCGGCCTGCTCTCCATTGCCTTCCCTTTCTCAGGTTCGATCTATGCAGCATCGTTGATAATCGGGTTCGGATTCGGCGCCCAAGTTCCATTGCTATTCGCCATAATCTCTGATTTATTCGGGTTGAAACATTACTCAACATTGCTCAATTGCGGGAACTTGGCAGTACCACTAGGATCATACATACTGAATGTGCATGTGGTTGGAAAGTTGTATGATGAGGAAGCCGTTAAAGCTGGTAATGTGAAGAACGGGAAAGGGCTGACTTGTACTGGCACTAATTGTTTTAGTGGCGCTTTCATGATTTTGTCCGTGGTGACTTTGTTTGGGGTGATGGCTTCATTTGTGCTCGCTTATAGGACAAGAGAGTTTTACAAAGGAGATATTTATAAGAAATATAATGATGATTTGGAGATTACTAAATCTGAGGTGGAACTCAATTCTTCTTTGGAAGTTAGGAAGAATGATGAACACATAAACAACTGTGATCATGATACCAACTCCTCCTCCAAATAG 1731 43.1 MDENKAVKNWQFVKQVVNGRWFMVFTSFLIMIGTGSTYLFGTYSKVLKTQFDYTQTQINTLGFAKDLGANLGIIAGLLAEVAPAWVLFLLGSTSNFLSYFIIWLFITGHIPKPQLWHMFLFICISANSQNFPNTAIMVTNVRNFPDHRGIILGLLKGFVGLGGAVLTQIYLAIYGHENPSNLVLLLSWLPSIVALLFFHSIRTIQARKHPHELNVFYHLLSVSITMAVFILFLTITQKQIVFSHAGYVGGVAVVIALLCLPLLIAIKKELFLFKLNKQKIDQSVSVSIPETIVETSQPTTQNVRCNKPQRGEDFSILQALLSKDMALIFIATVSGCGSSVAAIDNLGQIAESLRYPAQHINVFVSWLSIFNFFGRVSSGFISETMMIKYKLPRPLMFGFTQLLICLGLLSIAFPFSGSIYAASLIIGFGFGAQVPLLFAIISDLFGLKHYSTLLNCGNLAVPLGSYILNVHVVGKLYDEEAVKAGNVKNGKGLTCTGTNCFSGAFMILSVVTLFGVMASFVLAYRTREFYKGDIYKKYNDDLEITKSEVELNSSLEVRKNDEHINNCDHDTNSSSK 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7195340 7197070 - Sed0024432.1 Sed01g0968 700272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0968 576 Gene3D MFS general substrate transporter like domains 325 574 IPR036259 -
Sed01g0968 576 CDD MFS_Mch1p_like 19 516 - -
Sed01g0968 576 SUPERFAMILY MFS general substrate transporter 5 207 IPR036259 -
Sed01g0968 576 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 538 - GO:0016020(PANTHER)
Sed01g0968 576 SUPERFAMILY MFS general substrate transporter 224 528 IPR036259 -
Sed01g0968 576 Pfam Nodulin-like 20 266 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0968 Sed-Chr1:7195340 Sed11g0380 Sed-Chr11:3637781 1.50E-302 dispersed
Sed01g0967 Sed-Chr1:7187661 Sed01g0968 Sed-Chr1:7195340 6.40E-152 tandem
Sed01g0968 Sed-Chr1:7195340 Sed01g0969 Sed-Chr1:7200579 1.20E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0968 - - - 0.0