Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g0995 ATGGCGGCCGCAGGCGGTGGCAAGTCGCTCGAGCAAACCCCGACATGGGCCGTCGCCGTCGTCTGCTTCGTTTTGCTTCTCATCTCGATTTTCATTGAGTACATCATCCACCTCATTGGGCAGTGGCTGACAAAGAGACACAAACGGGCTCTATTCGAAGCACTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTCATATCACTGCTGCTGACAGTGGGGCAAGGTCTAATCTCAGACATATGCATCCCTGAACATGTAGCTGCCACGTGGCATCCTTGTACAAAGGAAAAAGAAATGGAGATGAACAAACACATTGAAAATTCAGCCGAACATTTGGACACTAATGGCCGGAGACTCCTCGACCTCGCCGGAAATGGTGGTTCTTTCCGGCGAAACTTGGCCGCAGCCGGAGGAACCGACAAGTGTGCTGCCAAGGGTCAAGTGCCATTTATATCTGCAGATGGAATTCATCAACTTCATATTTTCATCTTTGTGTTGGCTGTTTTCCATGTTTTGTACTGTGTTCTAACTTATGCATTGGCTAGAGCAAAGATGAGGAGCTGGAAAACCTGGGAAAGAGAAACCAAAACTGCAGAATACCAGTTTACACACGATCCAGAAAGATTTAGATTTGCAAGAGACACTTCGTTTGGGAGAAGACATTTGAGCTTTTGGACAAAGAATCCTGTGCTTATGTGGATCGTTTGTTTCTTCAGGCAGTTCGTAAGATCAGTTCCAAGAGTCGATTATTTGACCTTAAGACATGGGTTTATAATGGCACATTTGGCACCACAAAGCCATACGCAATTTGACTTTCAAAAATACATTAATCGTTCTCTTGAAGAGGACTTCAAAGTTGTCGTAGGAATTAGCCCACCAATCTGGTTCTTAGCTGTGCTATTTCTCCTCTCAAACACACACGGTTGGAGGGCATATCTATGGCTACCATTCATCCCACTCATCATTCTATTGCTGATTGGGACGAAATTGCAAGTGATAATTACAAAAATGGCCCTGAGAATACAAGAGCGGGGAGAAGTGGTCAAAGGAGTGCCGGTGGTTGAACCGGGAGATGACCTGTTCTGGTTCAACCGGCCCCGGCTGGTTCTTCATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTTCAACTCGCCTTCTTTGCTTGGACTTGGTATGAGTTCGGATTGAAATCTTGTTTCCACGAGCATATAGAGGATGTGGTGATTAGAATTTCAATGGGGGTGGCTGTACAAATCCTTTGCAGTTATGTTACTCTACCTCTTTATGCACTCGTCACTCAGATGGGTTCAACAATGAAGCCAACCATATTCAATGAGAGGGTGGCAGCAGCTCTTCACAACTGGTACCACTCGGCTCGGAAGCACATCAAACACAACCGTGGTTCCATCACCCCGATGTCGAGCCGACCAACCACTCCGACTCACCACATGTCACCGGTCCACCTTCTCCGCTACTACAAGAATGAAGTCGACAGCTTCCACACATCGCCAGTGAGAAGGTCGCCATTCGAGACCGATCGTTGGGATGATGATTCAACCTCACCCTCCCGTCATGTCGATGGTTCGTCTTCCTCACAACCCCATGTCGAGATGGGAGGCTATGATAGAGATCCTGTTGTACCGGGTTCGGCTCAAGTTGACTCGATCCAGCAGCCACGAACCCACACTCAGCATGCAATTGACATTGTCCACAAAGACTTTTCCTTTGAAAGAGTTGAATGA 1749 46.77 MAAAGGGKSLEQTPTWAVAVVCFVLLLISIFIEYIIHLIGQWLTKRHKRALFEALEKIKSELMLLGFISLLLTVGQGLISDICIPEHVAATWHPCTKEKEMEMNKHIENSAEHLDTNGRRLLDLAGNGGSFRRNLAAAGGTDKCAAKGQVPFISADGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWERETKTAEYQFTHDPERFRFARDTSFGRRHLSFWTKNPVLMWIVCFFRQFVRSVPRVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFLAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLVLHLINFVLFQNAFQLAFFAWTWYEFGLKSCFHEHIEDVVIRISMGVAVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAAALHNWYHSARKHIKHNRGSITPMSSRPTTPTHHMSPVHLLRYYKNEVDSFHTSPVRRSPFETDRWDDDSTSPSRHVDGSSSSQPHVEMGGYDRDPVVPGSAQVDSIQQPRTHTQHAIDIVHKDFSFERVE 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7382807 7390603 + Sed0012091.1 Sed01g0995 700299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g0995 582 Pfam Mlo family 8 495 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed01g0995 582 PANTHER MLO-LIKE PROTEIN 1 4 527 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed01g0995 582 MobiDBLite consensus disorder prediction 509 525 - -
Sed01g0995 582 MobiDBLite consensus disorder prediction 505 566 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g0995 Sed-Chr1:7382807 Sed05g2862 Sed-Chr5:39719941 2.40E-252 dispersed
Sed01g0994 Sed-Chr1:7348610 Sed01g0995 Sed-Chr1:7382807 5.30E-107 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g0995 K08472 - csv:101217225 1022.31