Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g1524 ATGGTAGTTGGAGATGGAATTCTCACTCCTGCAATATCGGTTTTATCTGCTGCGGGAGGGATCAAAGTAAACCAACCCCATGTGAGCAGTGGTGTAGTTGTGCTTGTTGCTGTTGTAATACTTGTAGGATTATTCAGCTTGCAACGTTATGGTACTGATAGAGTTAGTTGGCTCTTTGCTCCAGTTGTGCTACTTTGGTTTCTAGTAATTGGAGGTATAGGCATGTTCAACATCTTGAAATATGATAAAACCATTCTAAGAGCCTTTTCACCTGTGTATATTTATCGCTATTTTAGAAGGCGAGGGATGGATGGTTGGACGTCCCTCGGAGGTGTTCTGCTGAGTATAACAGGCACAGAGGCTCTATTTGCCGATCTAGCTCATTTTCGTGTAGCAGCTATACAGATTGCTTTTACAGTAGTTGTTTTTCCTTGCCTTCTCTTGGCATATTCTGGACAGGCTGCTTATCTTATGACCAATATGGAGCACGTGAGTGATGTCTTCTATCGTTCAATCCCAGATTCCATATATTGGCCTGTGTTTCTTGTTGCAACTGCTGCCGCTATAGTTGCTAGTCAAGCCACTATATCTGCAACATTTTCAATAATCAAGCAGGCTCATGCGCATGGCTGTTTTCCGAGGGTTAAAGTTGTCCATACGTCGAAGAACTTTCTCGGTCAGATATACGTTCCAGATATCAACTGGATCCTCATGCTTCTTTGCATTGCTGTGACAGCAGGATTTAAGAATCAAAGTCAAATTGGAAATGCTTATGGGACAGCGGTGGTTGTAGTCATGCTTGTGACCACACTGCTTATGATTCTAATCATGATCTTGGTGTGGCGCTGTCATTGGGTCATTGCCCTGATTTTCACCACACTGTCACTAATGGTGGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTCCCCCTTGTGATTGCTGCAGCTTTTCTTATCGTCATGTATGTGTGGCATTATGGTACTGTTAAACGATACGAATTCGAACTCCATAGTAAAGTCTCAATGGCGTGGGTTCTCGGACTTGGTCCCAGTCTAGGACTAGTCCGCGTTCCTGGGATTGGACTTGTGTATACCGAGCTTGCAAGCGGCGTACCTCACATATTTTCCCATTTCATTACGAATTTGCCTGCCATCCACTCTGTTGTTGTGTTTGTCTGTGTGAAATACCTTCCAGTCTACACAGTGCCAGAGGAAGAAAGGTTCTTGGTAAAGCGGATAGGACCCAAGAATTTTCACATGTTTCGTTGTGTTGCGAGATACGGTTATAAAGACCTCCACAAAAAGGATGATGATTTTGAGAAAAAGCTTTTCGATAGTATCTTCCTCTTTGTCAGGCTTGAGTCCATGATGGAAGGTTGTTCGGACTCCGATGAGTACAGTTTGTATGGCCAGCAAACTGAGCATTCAAGGGATGGCCTGTTGATTGGTAATGGCAACACAAATTTATCTAATGTGGACATGACATTCTCGTCCGTCGACTCAATCGTGCCCGTTAGATCTCCGGTGCGTTCAAATAACACACTAAGATTATCTGAGCAAGCAAGCAACCATACGGATAGCGACGAGATTGAATTCTTGATTAGGTGTAGAGATGCTGGGGTGGTGCACATATTGGGGAACACTGTAATTAGGGCAAGAAGGGAATCAAAATTCTATAAGAAGATAGCTGTTGATTATGTATATGCGTTTCTTAGGAAGATTTGCAGGCAGAACAGTGTGATTTTCAATGTTCCTCATGAGAGTCTATTAAATGTTGGGCAAATTTTCTATGTATAG 1818 43.12 MVVGDGILTPAISVLSAAGGIKVNQPHVSSGVVVLVAVVILVGLFSLQRYGTDRVSWLFAPVVLLWFLVIGGIGMFNILKYDKTILRAFSPVYIYRYFRRRGMDGWTSLGGVLLSITGTEALFADLAHFRVAAIQIAFTVVVFPCLLLAYSGQAAYLMTNMEHVSDVFYRSIPDSIYWPVFLVATAAAIVASQATISATFSIIKQAHAHGCFPRVKVVHTSKNFLGQIYVPDINWILMLLCIAVTAGFKNQSQIGNAYGTAVVVVMLVTTLLMILIMILVWRCHWVIALIFTTLSLMVECSYFSAVLFKVDQGGWVPLVIAAAFLIVMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLIGNGNTNLSNVDMTFSSVDSIVPVRSPVRSNNTLRLSEQASNHTDSDEIEFLIRCRDAGVVHILGNTVIRARRESKFYKKIAVDYVYAFLRKICRQNSVIFNVPHESLLNVGQIFYV 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11011007 11018671 + Sed0002203.2 Sed01g1524 700828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g1524 605 Pfam K+ potassium transporter C-terminal domain 365 602 IPR053952 -
Sed01g1524 605 NCBIfam potassium uptake protein 1 604 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed01g1524 605 Pfam K+ potassium transporter integral membrane domain 1 351 IPR053951 -
Sed01g1524 605 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 604 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g1524 Sed-Chr1:11011007 Sed08g2385 Sed-Chr8:37045473 0.00E+00 dispersed
Sed01g1523 Sed-Chr1:11011007 Sed01g1524 Sed-Chr1:11011007 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g1524 K03549 - csv:101217915 1076.23