Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g2333 ATGAACCGTGCATTCAATTCATACCCAGATGAAAAACATGCAAACATTAGGAGATTCATGAGGCACACTGAGGATGAACAGCACAAGGATCCCCACAGTGGTTTCAATTTCAAGAGCCATCAAGAAATCAAATGTGGGTTCAGTTCGATTCGAGTCATGGGTTTGTTTGTGGTTCTCATGATGTTCGTTTCTGTGATCTTTTCCGTCTCTGTGGTTCTTAGAGACCCACCATCGGATGCTGTGATTGACGGTTCAGATGTGTGGATTTCTCAGTTGAATTCTGGCCCAGATTACGAGGATGGAGATCTTCATACGGTTGTACAGCCAGCTGATAAACTGCTTGGTGGCCTTCTTTCTGCCAAACATGGGGTAGGTTCTTGTCTCAGTAGGTACAATTCAGTTGCTTATCTGCACAAGCTGGCTTATGAACCCTCTTCTTATCTAATCTCCAAATTGCGGAGTTACGAAGATCTTCATAAGCGATGTGGAGTTTATACCGAATCTTACAACAAAACTTTGGAGCATCTTAGATCTAATGGTAGCACCAGCTCTGCTGACTGTAAATATCTTCTCTGGATTTCCTTCAGTGGATTAGGGAATAGAATACTAACTCTCGCTTCAGCATTTCTTTATGCTCTCCTCACAAATCGAGTTCTACTAGTTGACCCCGGAACTGACATGGCTGATCTCTTCTGTGAACCATTTCCCGAGGTTTCCTGGTTTCTTCCCCAAGATTTCCCATTAAAAAAGGAGTTCAGTAACTTCAACCAGAACTCTCCTAATTGCTATGGGAAACTAATGAAGAATAGCATGACAACAGATTCCAGTGGAATGATCTTGCCATCTGTTGTTTATCTTCATTTGGTCCATGATTATGATGATGATGATAAGCTTTTTTTCTGTGATCAAGACCAAGCTCTGCTGCAGCAATCGCCTTGGCTTGTTATGAAAACGGACAACTATTTTGTCCCGTCTCTCTTTTTGATCCCGTCATATGAAAAAGAACTTAATGATCTTTTCCCAAGTAAAGATACAGTTTTCCACTTCTTGGGTCGATATCTGTTTCATCCCACGAATTCGGTTTGGGGACTGATTACGAGATACTATCAAGCTTACTTGGCTAGAGCTACGGAAAGAATAGGCATTCAGATTAGAGTGTTTGATACAGGGGCTGGACCTTTTCAACACATCCTGGATCAGGTTCTGGCCTGTACCCTGAAGGAAAGTTTGTTGCCACAAACCGAAAGGCAAACCGAAGTCATCGGTCCAGCCAGTAATCAAAAGTCGAAGGCCGTGTTGATAACTTCCCTAAGTGCTGGTTACTTGGAGAAGCTGAGAGACATTTATTGGGAAAATCCAACAGTGACGGGAGAGAGGATTAGTTTCTACCAACCAAGTCATGAGGAGCACCAGCAAACTGAGAAGAGTATGCATAACCAGAAAGCATTGGCAGAGATGTATTTGTTAAGTACAACTAATGTGTTAGTCACCAGCTCATGGTCAACCTTCGGATATGTCGCTCAAGGTCTTGGCGGTCTGAAACCATGGATATTATACAAACCCGAGAATCGTACTGCACCCGATCCCCCTTGTCGTCGAGCCATGTCCATGGAGCCTTGTTTCCATGCACCTCCTTTCTATGACTGCAAGGCTAAGAAAGGAGTGGACACTGGTAAACTTGTTCCTCATGTGAGGCATTGTGAGGACATGGCCTGGGGGCTTAAGCTGGTTGATCATTATGATTGA 1746 43.53 MNRAFNSYPDEKHANIRRFMRHTEDEQHKDPHSGFNFKSHQEIKCGFSSIRVMGLFVVLMMFVSVIFSVSVVLRDPPSDAVIDGSDVWISQLNSGPDYEDGDLHTVVQPADKLLGGLLSAKHGVGSCLSRYNSVAYLHKLAYEPSSYLISKLRSYEDLHKRCGVYTESYNKTLEHLRSNGSTSSADCKYLLWISFSGLGNRILTLASAFLYALLTNRVLLVDPGTDMADLFCEPFPEVSWFLPQDFPLKKEFSNFNQNSPNCYGKLMKNSMTTDSSGMILPSVVYLHLVHDYDDDDKLFFCDQDQALLQQSPWLVMKTDNYFVPSLFLIPSYEKELNDLFPSKDTVFHFLGRYLFHPTNSVWGLITRYYQAYLARATERIGIQIRVFDTGAGPFQHILDQVLACTLKESLLPQTERQTEVIGPASNQKSKAVLITSLSAGYLEKLRDIYWENPTVTGERISFYQPSHEEHQQTEKSMHNQKALAEMYLLSTTNVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKKGVDTGKLVPHVRHCEDMAWGLKLVDHYD 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17627005 17630234 + Sed0013749.1 Sed01g2333 701637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g2333 581 Pfam Xyloglucan fucosyltransferase 103 550 IPR004938 GO:0008107(InterPro)|GO:0016020(InterPro)|GO:0042546(InterPro)
Sed01g2333 581 Gene3D - 184 237 - -
Sed01g2333 581 FunFam Galactoside 2-alpha-L-fucosyltransferase 185 236 - -
Sed01g2333 581 Gene3D - 364 528 - -
Sed01g2333 581 PANTHER FUCOSYLTRANSFERASE 2-RELATED 46 578 IPR004938 GO:0005794(PANTHER)|GO:0008107(InterPro)|GO:0008417(PANTHER)|GO:0009969(PANTHER)|GO:0016020(InterPro)|GO:0042546(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2333 Sed-Chr1:17627005 Sed07g1952 Sed-Chr7:34033334 1.90E-196 dispersed
Sed01g2333 Sed-Chr1:17627005 Sed06g1510 Sed-Chr6:39776036 9.50E-188 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g2333 K13681 - csv:101219153 998.038