Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g2394 ATGGCGACGGCGGCGATGAAGGGTAAAGTTTGTGTGACAGGCGCCGGAGGGTTCATTGGCTCGTGGGTGGTCAAGCTTCTGCTATCCAGGGATTATACCGTCCACGGGACTGTTAGGGAACCCAGTGATCCCAAATATGATCACTTGAGAAAACTTGAGAAAGGGGCCGAGAATCTGAAACTGTTTAAGGCCGATTTACTGGACTATGAGTCTCTATGTGCTGCAATTGCAGGATGTGATGGAGTTTTCCATGTTGCTAGTCCAGTTCCTTCCACAACTTCATCAAACCCTGAGAAAGAAGTGCTTGAACCTGCTATAAAGGGCACACTTAATGTGCTTGAAGTGTGCGCCGAAGCAAAAGTCAAACGAGTAGTTGTAGTATCCTCTGTTGCTGCAGTGTTTTGCAATCCAAGTTGGCCTCAAGGTCGAGTAAGGGATGAAAGTTCTTGGTCTGATAAGGAGTACTGCAGAGCTACTAAGAACTGGTACTTTCTGTCAAAGACAGAAGCTGAAAGTGAAGCCTTGGAATTTGGGAGAAGACGAGGGCTTGATGTTGTGACTATTTGTCCTACCCTTGTTATCGGGCCGATTTTGCAGCCAACAATAAACTCCAGCAGCTTGGTTCTTCTTAAAATTCTTAAAGAAGGATGCGAGTTGATGGAAAATAGGCCACGGATGTTAGTAGATGTACGAGACATAGCGGAGGCGCTACTTCTTTTATACGAGAAGGCAGAGGCAGAAGGAAGGTACATTTGTACAGCGCATGAAATGGATACAAGGGAGCTGGTGGATGTGTTGAAGAGCAAGTACCCTGATTATAGCTATCCAAAGAAGTTGTGCGATGGGAACAATGAGTCGATAAGTTTAAGCTCGGAGAAGCTGCAAAGCTTGGGTTGGAAGTATCGGGCGCTGGAGGAGACGCTTGCGGATGCTGTTGAGAGTTTCAAAGATGCGGGCATGCTGGACTGA 969 46.85 MATAAMKGKVCVTGAGGFIGSWVVKLLLSRDYTVHGTVREPSDPKYDHLRKLEKGAENLKLFKADLLDYESLCAAIAGCDGVFHVASPVPSTTSSNPEKEVLEPAIKGTLNVLEVCAEAKVKRVVVVSSVAAVFCNPSWPQGRVRDESSWSDKEYCRATKNWYFLSKTEAESEALEFGRRRGLDVVTICPTLVIGPILQPTINSSSLVLLKILKEGCELMENRPRMLVDVRDIAEALLLLYEKAEAEGRYICTAHEMDTRELVDVLKSKYPDYSYPKKLCDGNNESISLSSEKLQSLGWKYRALEETLADAVESFKDAGMLD 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17976407 17986758 - Sed0004301.1 Sed01g2394 701698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g2394 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 314 IPR050425 GO:0016616(PANTHER)
Sed01g2394 322 Gene3D - 2 322 - -
Sed01g2394 322 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Sed01g2394 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 316 IPR036291 -
Sed01g2394 322 CDD FR_SDR_e 10 299 - -
Sed01g2394 322 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2394 Sed-Chr1:17976407 Sed06g2054 Sed-Chr6:44617769 2.70E-75 dispersed
Sed01g2394 Sed-Chr1:17976407 Sed07g0750 Sed-Chr7:5602675 7.60E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g2394 - - - 0.0