Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g2615 ATGAAATTATCTCTCATTTCCTCCTCCGACATCGTCGCCGGAATCTTCGCCGCCGTCATCTTTCTTTATGCCATCTCCAAGTTATATGGAAGATTCGCTGCCCATCGACGGAGGCCGCCACCGCAAGCCAGCGGCGCGTTGCCGTTGATCGGCCACCTCCACCTCCTAGCTGGGAAAGAGCCAGCCCACATAACCTTTGCAAAAATGGCTGACAATTTCGGGCCAATTTTCACCTTGAAATCAGGTGTGTTCACAAATTTAATTGTGAGCAATTGGGAAATAGCAAAAGAATGTCTTACTACAAACGACAAGATCTTTGCTTCTCGTCCAACGTCGGCAGCCTCAAAAATTTTGGGTTATGATTGCGCCATGATGGGGTTAAGCCCCTACGGTCCACATTGGCGCTACGTTCGCAAGCTCGCCACGCTCGAGCTCTTGACGAGTCACCGTCTCGAGCAGCTCCAACACATAAGAATCTTTGAGGTTAGAAGTTCGATTCGGAGACTATACGGCCTATGCGTCAACAATAGTAAAAACAATGGAAATGACAAGGTGTTGGTGGAGATGAAGGCTTGGTTTGGAGACATAACTCTCAACGTGATATTAAGGATGGTGGTCGGAAGGCGATTCTCGACCGCGGTGGACGGGGACGGTAACGAGGAGTATCGAAAGGCGTTAAGGGATTTCTTCGAATGGTTTGGGGTGTTTGTTCCCTCGGATTCGTTTCCGTGTTTGAAGTGGTTTGATATTGGAGGACATGAGAAGGCTATGAAAAAGACAGCAAAAGTTCTTGATGAAGTGTTTGATAAATGGCTTGAAGAGAACAGACAAAAGAGGAGTTTTGGTGAAGGGAAGATGGAGGAGGAGCATGACTTCATGAATGTGATGATTTCTAGTGTTAAAGATAATGGAGAGCTTTCTAACTATGATGCTGATACTGTCACCAAGGCTATATGTTTGACTCTTATATTAGCAGGATCCGACACAACAACAGTAACAATGATATGGGCTCTTTCTTTACTTCTCAACAATGAAGGCAAACTCAAGAAAGCTCAATTCGAACTCGATGAACAAGTCGGGCGACAAAGACAAGTGAAAGAGTCGGATATAAAAAACTTACCATATCTACAAGCCATAGTTAAAGAAACACTACGCTTGTATCCAGCAGCGCCAATCATGATTCCTCACGAATCAATGGAGGATTGCAAGGTTGCTGGCTACGACATCCCAAAAGGAACAAGGCTCATAGTAAATGTTCAAAAGCTTCAAAGAGATGAACAAATATGGGAAAATCCTTGCGAATTTCGACCCGAGAGATTTCTAACGAGTCACAAAGATTTTGATGTTAGAGGACAAAGCCCTCAATTCATACCATTTGGAAGTGGTAGAAGAATGTGCCCCGGTGTTTCATTTGCTCTCCAAGTTTTGCATTTGACACTTGCAAATTTGCTTCATGGATTTGAAATTAGTCGACCGTTTGACGAGGATCTTGATATGGAGGAGAGTGCTGGAATGACAAGTATTAGGAAGAATCTACTTGAGGTGGCTTTGAGTCCACGGCTTCTAGCTCAAGTTTATGAGTGA 1584 44.38 MKLSLISSSDIVAGIFAAVIFLYAISKLYGRFAAHRRRPPPQASGALPLIGHLHLLAGKEPAHITFAKMADNFGPIFTLKSGVFTNLIVSNWEIAKECLTTNDKIFASRPTSAASKILGYDCAMMGLSPYGPHWRYVRKLATLELLTSHRLEQLQHIRIFEVRSSIRRLYGLCVNNSKNNGNDKVLVEMKAWFGDITLNVILRMVVGRRFSTAVDGDGNEEYRKALRDFFEWFGVFVPSDSFPCLKWFDIGGHEKAMKKTAKVLDEVFDKWLEENRQKRSFGEGKMEEEHDFMNVMISSVKDNGELSNYDADTVTKAICLTLILAGSDTTTVTMIWALSLLLNNEGKLKKAQFELDEQVGRQRQVKESDIKNLPYLQAIVKETLRLYPAAPIMIPHESMEDCKVAGYDIPKGTRLIVNVQKLQRDEQIWENPCEFRPERFLTSHKDFDVRGQSPQFIPFGSGRRMCPGVSFALQVLHLTLANLLHGFEISRPFDEDLDMEESAGMTSIRKNLLEVALSPRLLAQVYE 527
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 20032739 20036727 - Sed0017927.1 Sed01g2615 701919
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed01g2615 527 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed01g2615 527 SUPERFAMILY Cytochrome P450 45 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 CDD CYP82 74 520 - -
Sed01g2615 527 Pfam Cytochrome P450 42 506 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 Gene3D Cytochrome P450 31 521 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed01g2615 527 PANTHER CYTOCHROME P450 82C3-RELATED 16 521 IPR050651 -
Sed01g2615 527 FunFam Cytochrome P450 82C4 31 518 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2615 Sed-Chr1:20032739 Sed13g1694 Sed-Chr13:21993729 3.80E-212 dispersed
Sed01g2614 Sed-Chr1:20019544 Sed01g2615 Sed-Chr1:20032739 4.80E-164 tandem
Sed01g2615 Sed-Chr1:20032739 Sed01g2616 Sed-Chr1:20038883 2.50E-110 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g2615 - - - 0.0