Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g2642 ATGCTCGACCGAACCGGAGAACAGTTTGCTTCGATGAGTGTCTCAGCACTATTAGGACTTGCCCGCTTCACTGCACCGTCGTCTTCTCTCATTTCCAATTTCAACAAAGCATTCATCGACAAAATCTCCATTGGAAGGCAGTATCGGAACTTCCATCCCATGGCTTCATCGATTTCTTCTTCGCCCAACACCAACAAAGACGCCTCAGAAGTAGTATCAGACCACCTCGGCCCAATCACTGCGCCGTACGGCACCTGGAAGTCGCCAATCACCGCCGACGTTGTCACCGGCGCCTCCAAGCGACTTGGTGGTACTGCCGTCGACGGCAGTGGACGCCTTGTCTGGCTCGAATCACGCCCCACTGAATCCGGGCGGGGAGTGCTCGTTAAGGAATCGGAGAAGCTAGGGGATGAGCCTAGTGATATTACTCCGAAGGAGTATTCCGTGCGGAATACGACGCAGGAATACGGCGGTGGTGCATTCGCGGTCGCCGGAAATATTGTTGTTTTTTCGAATTACAAGGACCAGAGACTCTACAAGCAATCCTTAAATTCAGCAGATTCGCCACCGCAAGCGCTTACTCCCGATTACGGTGAACGATCAGTCAGTTATGCAGATGGGGTGTTTGATTATCGTTTTAATCGTTTAATTACTATCCAGGAAGATGGACGTCAAAGTAGCTTGAATCCAATCACCACAATTGTGTCTGTAGAACTTGACGGCAAGGATATTAATGAACCGAAGGTTTTAGTTGAAGGAAATGATTTCTACGCCTTCCCACGAGTGGACCCTAAAGGGGAACGGATTGCATGGATTGAATGGGGCCATCCTAACATGCCATGGGATAAATCTGAGCTCTGGGTTGGCTACCTTTCTGAGAATGGAGAGGTCTACAAGCGGGTTTGTGTCGCTGGTGGTGATCCAAAGCTTGTGGAATCTCCTATTGAACCGAAGTGGTCTGCTCAGGGAGAACTATTCTTTATTACTGATAGACTAAGTGGGTTTTGGAATCTCTATAAATGGTTTGAGGCTAACAATGAGGTGGCTCCAGTATATTCTTTAAATGCTGAGTTTTCCCGACCCTTGTGGGTTTTTGGCATGAATTCTTATGAATTCCTAAAGAGCGATGTTGGGAAGAATGTCATAGTTTGCAGCTACAGGCAGCGTGGGCGATCTTATATTGGAGTTTTTGATGAGATGCAAAGCTCACTGTCCTTGCTTGATATCCCATTCACGGATATTGATAATATTACTCTTGGAAGTCATTGTATATATGTGGAAGGATCATCGGCACTTCATCCATCATCTATTGCCAAGGTGACCCTAAATGAAAGAACCTTAGAACTGGTAGGTTTCACTATTATCTGGTCATCTTCGCCAGATATTTTGAAATTTGAATCGTACTTCAGCGTTCCAGAGTTGATTGAATTTCCAACTGAAATTCCTGGCCAAAATGCTTATGCCTACTTTTATCCACCGACCAATCCTATTTACCAGGCTAGTCAGGATGAAAAGCCTCCACTGTTGTTGAAAAGCCATGGAGGGCCAACTGCTGAAACACGTGGAATTTTAAATCCTAGCATTCAATATTGGACTAGCCGAGGCTGGGGTTATGTTGATGTCAATTATGGTGGTAGCACTGGTTATGGAAGAGAGTACCGAGAAAGGCTTTTGAGGCAGTGGGGAATTGTTGATGTCAATGACTGCTGCAGTTGTGCAAGATTTTTGGTGGATTCTGGAAAGGTTGATGGAGAACGATTATGCATCACTGGGGGCTCTGCTGGGGGATATACCACATTAGCTGCTCTTGCTTTCAGAGATACGTTTAAGGCAGGAGCTTCCTTGTACGGGATAGCTGACTTAAGCTTGTTGAGAGCAGATACACACAAGTTTGAATCTCATTATATTGATAATCTCGTTGGGAATGAAAAAGATTACTTCGAGAGGTCACCAATCAATTTTGTTGACAAATTTTCTTGCCCTATAATCCTATTCCAGGGATTGGAGGACAAAGTTGTATTACCTAATCAATCTCATAAGATTTATCATGCATTGAAGGATAAGGGCTTGCCTGTTGCTCTAGTCGAGTATGAAGGAGAACAACATGGTTTTCGCAAGGCAGAAAATATTAAATTTACCCTGGAACAGCAAATGATGTTCTTTGCTCGATCAGTTGGACGCTTCCAGGTTGCAGATGATATTAATCCAATCAAAATTGATAACTTTAACTGA 2232 44.62 MLDRTGEQFASMSVSALLGLARFTAPSSSLISNFNKAFIDKISIGRQYRNFHPMASSISSSPNTNKDASEVVSDHLGPITAPYGTWKSPITADVVTGASKRLGGTAVDGSGRLVWLESRPTESGRGVLVKESEKLGDEPSDITPKEYSVRNTTQEYGGGAFAVAGNIVVFSNYKDQRLYKQSLNSADSPPQALTPDYGERSVSYADGVFDYRFNRLITIQEDGRQSSLNPITTIVSVELDGKDINEPKVLVEGNDFYAFPRVDPKGERIAWIEWGHPNMPWDKSELWVGYLSENGEVYKRVCVAGGDPKLVESPIEPKWSAQGELFFITDRLSGFWNLYKWFEANNEVAPVYSLNAEFSRPLWVFGMNSYEFLKSDVGKNVIVCSYRQRGRSYIGVFDEMQSSLSLLDIPFTDIDNITLGSHCIYVEGSSALHPSSIAKVTLNERTLELVGFTIIWSSSPDILKFESYFSVPELIEFPTEIPGQNAYAYFYPPTNPIYQASQDEKPPLLLKSHGGPTAETRGILNPSIQYWTSRGWGYVDVNYGGSTGYGREYRERLLRQWGIVDVNDCCSCARFLVDSGKVDGERLCITGGSAGGYTTLAALAFRDTFKAGASLYGIADLSLLRADTHKFESHYIDNLVGNEKDYFERSPINFVDKFSCPIILFQGLEDKVVLPNQSHKIYHALKDKGLPVALVEYEGEQHGFRKAENIKFTLEQQMMFFARSVGRFQVADDINPIKIDNFN 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 21014244 21021722 + Sed0005929.2 Sed01g2642 701946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g2642 743 SUPERFAMILY DPP6 N-terminal domain-like 158 361 - -
Sed01g2642 743 SUPERFAMILY alpha/beta-Hydrolases 456 723 IPR029058 -
Sed01g2642 743 Gene3D alpha/beta hydrolase 465 731 IPR029058 -
Sed01g2642 743 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 77 738 IPR050585 -
Sed01g2642 743 Pfam Prolyl oligopeptidase family 527 725 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2642 Sed-Chr1:21014244 Sed13g1713 Sed-Chr13:22179292 2.60E-307 dispersed
Sed01g2641 Sed-Chr1:21014244 Sed01g2642 Sed-Chr1:21014244 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g2642 - - - 0.0