Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g2884 ATGGAGGTCACCGGAACCACCACCGGAAACATAGGAGCAACAGAAAACGGTCCACCGACAAGAAAAACGGCGACCTTCCTCCTCGGCGTGCTCAGGGGACCATGGTTCATGATATTCTGCTCGTTCCTGATCATGTCCATGGCCGGAACGCCGTACATGTTCGGCCTATACTCGGGCGCCATAAAATCCGTGCTGGGCTACGACCAAAGCACTCTAAATCTAATCAGCTTCTTCAAGGACCTCGGCACGAACGTGGGCGTGGCCTCGGGGCTGATCGCGGAAGTGACCCCGCCGTGGGTGGTGCTGGCGATGGGCGCGGGGCTGAACTTCGCGGGGTACTTCATGATCTGGATGTCGGTGACGGAGAAGGTGGCGGCGCCGGGGGTGTGGGCGATGAGCGTGTACATAGGTTTGGCGGCGAACTCGACGGCGTTTGCGAACACGGGGGCGCTCGTGACTTGCGTGAAGTGTTATCCGGCGAGGAGAGGGGTTGTTTTGGGGATCTTGAAAGGGTATGTGGGATTGAGCGGCGCGATTTTGACGCAGCTTTATCATGCCATTTATGGGGATGACTCCAAGTCCTTGATTTTGCTCATTGCTTGGCTTCCCGCGCTTATTTCCGTTGTGTTCTTGAGGACCATTAGGCTTATCAACCTTCAGCATCGCCCTAATGAACGTGCAGTCTTCTACAGGTTTCTGTACATTTCTCTAGGCCTGGCCGGATTTCTGATGGTGATGATAATCCTTCAACAAAAATTCAATTTCTCCCACATCGAATACAGTTGCAGCGCCGCCATGGTCGTCTTCCTCCTCTTCTTCCCTCTCCTCATCGTCATCGCCGAAGACTACAAATACTCCCACAAAAGCCTCACCCAATTCCGAAATCCACCTCCAGTCACCCTCGCCACTCAAAGACCGCCGCCGCCATCCTGCTGGAAAACCGCCCTGCATCCGCCGCAGAGAGGCGAGGATTTCACGATCCTCCAGGCGCTGTTCAGCGGCGACATGCTCCTTCTGTTCCTCTCCACCGCGTGCGGCGTCGGTGGATCCCTGACCGCCATCGACAACCTCGGCCAGATCGGCGCGTCTCTCCGGTACCCGAAACAGAGCATAAGCACATTCGTGTCGCTCGTGAGCATATGGAATTACTTGGGGCGCGTAGTTTCAGGCTTCGCTTCAGAAATCGTTCTCACCAAATACAAGTGCCCTAGAACCCTCATTCTCACCTTCATCCTCCTCCTCTCCTGCGCCGGCCACCTCCTCATCGCCTTCAACCCCTCCGGCGGCCTCTACTTCGCCTCCGTCGTGATCGGATTCTGCTACGGCGCTCAATGGCCGATTCTCTTCGCCATCATTTCCGAGATCTTCGGCCTTAAATACTACTCCACGCTCTACAATTTCGGATCTGTGGCGAGTCCGATCGGGCTGTATTTTCTCAATGTTCGCGTCGCCGGACATCTGTACGACGTGGAGGCGAATCGGCAGCTGGAGGCGGCGGGGCGGCGGAGGGCGGCCGGAGAAGCGTTGAACTGCGTCGGCGTTGACTGCTTTAAAATGTCGTTTGTGATAATTACGGGAGTTACTTTGATCGGAGCTCTGTTTTCGTTTGTTTTGGTGGTTAGAACCAGAGCGTTTTACAAGACTGATATTTATAGGAGGTTTAGGGAAGAACAAGAAGAGGAAGATGAAGAAATTAGGGTTGGGGAAATGGTTTCAAGAAACGATGTCGTTTTGAGGGATCATAGAAATGATCACAAGTAA 1761 54.34 MEVTGTTTGNIGATENGPPTRKTATFLLGVLRGPWFMIFCSFLIMSMAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGVASGLIAEVTPPWVVLAMGAGLNFAGYFMIWMSVTEKVAAPGVWAMSVYIGLAANSTAFANTGALVTCVKCYPARRGVVLGILKGYVGLSGAILTQLYHAIYGDDSKSLILLIAWLPALISVVFLRTIRLINLQHRPNERAVFYRFLYISLGLAGFLMVMIILQQKFNFSHIEYSCSAAMVVFLLFFPLLIVIAEDYKYSHKSLTQFRNPPPVTLATQRPPPPSCWKTALHPPQRGEDFTILQALFSGDMLLLFLSTACGVGGSLTAIDNLGQIGASLRYPKQSISTFVSLVSIWNYLGRVVSGFASEIVLTKYKCPRTLILTFILLLSCAGHLLIAFNPSGGLYFASVVIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSVASPIGLYFLNVRVAGHLYDVEANRQLEAAGRRRAAGEALNCVGVDCFKMSFVIITGVTLIGALFSFVLVVRTRAFYKTDIYRRFREEQEEEDEEIRVGEMVSRNDVVLRDHRNDHK 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 24515583 24518626 - Sed0018451.1 Sed01g2884 702188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g2884 586 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 33 555 - GO:0016020(PANTHER)
Sed01g2884 586 SUPERFAMILY MFS general substrate transporter 225 547 IPR036259 -
Sed01g2884 586 SUPERFAMILY MFS general substrate transporter 18 216 IPR036259 -
Sed01g2884 586 CDD MFS_Mch1p_like 33 532 - -
Sed01g2884 586 Gene3D MFS general substrate transporter like domains 216 490 IPR036259 -
Sed01g2884 586 Pfam Nodulin-like 34 279 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2884 Sed-Chr1:24515583 Sed06g2020 Sed-Chr6:44310356 2.30E-202 dispersed
Sed01g1215 Sed-Chr1:9080409 Sed01g2884 Sed-Chr1:24515583 1.60E-24 transposed
Sed01g2884 Sed-Chr1:24515583 Sed03g0723 Sed-Chr3:4360226 3.10E-77 wgd
Sed01g2884 Sed-Chr1:24515583 Sed07g2239 Sed-Chr7:38326758 2.00E-209 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g2884 - - - 0.0