Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g3136 ATGCTTATGGGATTTATTTCCCTTCTGCTCACTGTATTTCAAGGCGCAATCTCTAAATTCTGTGTTCCTGCGAGTTTGACTGAGCATTTGCTTCCATGTAGTATTGAGGATAAACAGAAACAGACACAGAAACATAACGCTGGACATGGTGAAACGGAGCATTTTCAAACGTTATTCGTTTCGAGTATTTCTGGTACGACTAGGCGTCTTTTAGCTGAGGAATCTGCTTCACAGAATGGTTATTGTGCTCAGAAGAATAAGGTGCCATTGCTATCACTTGAAGCTTTGCATCATCTACATATTTTTATCTTCATCCTAGCTATCATCCACGTGACATTTTGTGTTCTCACTGTAGTTTTTGGAGGATTGAGGATTCGTCAATGGAAGCATTGGGAGAAATCTACTGCACAAGAGAATTATGAAGCCGAACCAGTTCTAAAACCACAAGTCACCCATGTCCGTCAACATACTTTTATCAAAGACCACTTTTTGGGCATTGGTAAATTATCCCTCCTTAGTTGGGTGCGTTCCTTCTTCAAGCAATTTTATGCATCTGTAACAAAATCAGATTATTTGATGTTACGACTTGGTTTCATTACGACACACTGTAGGGGAAACCCGAAGTTTAATTTTCACAAGTACATGATACGTTCACTTGAAGATGATTTCAAGCATGTCGTCGGTATCAGTTGGTGTTTTTGGATCTTCGTAATTGTCTTCTTGCTCCTTAATATTCATGGTTGGCATACATATTTCTGGATATCATTCGTTCCTCTTATCCTTCTGCTTGCTGTGGGAACAAAGCTGGAACATATTATAACCCAGCTGGCTCATGAAGTTGCAGAGAAGCATATACCAATAGAAGGTGATCTCATAATCCAACCATCCGACGATCACTTTTGGTTTCAGCGACCCCGTATTGTTCTCTTCTTGATTCATATTATACTTTTCCAAAATGCTTTCGAGATCGGATTCTTCTTCTGGATATTGGTTCAATATGGCTTCGACTCGTGTATCATGGGGGAAGTCTACTATATCATTCCAAGGCTTATTATTGGGGTGCTTGTTCAGGTTCTTTGCAGTTACAGCACCCTACCGCTCTACGCCATTGTCACACAGATGGGAAGCTCTTTCAAGAAAGCAATATTTGATGAACATATACAAGTAGGCCTAGTTGGATGGGCTCAAAAGGCAAAGAAAAAAAAGGGACAGAAAGCAGCAGCTTGTGGCTCCAGCCCAGGAAACAAGGAATCAGGTTCTATGGGAATTCAGCTGGGAAATATTCTGCGCATGGCATCTGCATCAGGAGAATTTAACCTTGAGGATTCCAAATCAAATGATATTCCTTAA 1350 40.52 MLMGFISLLLTVFQGAISKFCVPASLTEHLLPCSIEDKQKQTQKHNAGHGETEHFQTLFVSSISGTTRRLLAEESASQNGYCAQKNKVPLLSLEALHHLHIFIFILAIIHVTFCVLTVVFGGLRIRQWKHWEKSTAQENYEAEPVLKPQVTHVRQHTFIKDHFLGIGKLSLLSWVRSFFKQFYASVTKSDYLMLRLGFITTHCRGNPKFNFHKYMIRSLEDDFKHVVGISWCFWIFVIVFLLLNIHGWHTYFWISFVPLILLLAVGTKLEHIITQLAHEVAEKHIPIEGDLIIQPSDDHFWFQRPRIVLFLIHIILFQNAFEIGFFFWILVQYGFDSCIMGEVYYIIPRLIIGVLVQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHIQVGLVGWAQKAKKKKGQKAAACGSSPGNKESGSMGIQLGNILRMASASGEFNLEDSKSNDIP 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55886123 55901577 - Sed0027952.1 Sed01g3136 702440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g3136 449 PANTHER MLO-LIKE PROTEIN 1 1 417 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed01g3136 449 Pfam Mlo family 1 417 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3136 Sed-Chr1:55886123 Sed04g2149 Sed-Chr4:35622715 2.40E-199 dispersed
Sed01g3136 Sed-Chr1:55886123 Sed09g0123 Sed-Chr9:962428 1.90E-236 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g3136 K08472 - csv:101211868 723.776