Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g3136 ATGCTTATGGGATTTATTTCCCTTCTGCTCACTGTATTTCAAGGCGCAATCTCTAAATTCTGTGTTCCTGCGAGTTTGACTGAGCATTTGCTTCCATGTAGTATTGAGGATAAACAGAAACAGACACAGAAACATAACGCTGGACATGGTGAAACGGAGCATTTTCAAACGTTATTCGTTTCGAGTATTTCTGGTACGACTAGGCGTCTTTTAGCTGAGGAATCTGCTTCACAGAATGGTTATTGTGCTCAGAAGAATAAGGTGCCATTGCTATCACTTGAAGCTTTGCATCATCTACATATTTTTATCTTCATCCTAGCTATCATCCACGTGACATTTTGTGTTCTCACTGTAGTTTTTGGAGGATTGAGGATTCGTCAATGGAAGCATTGGGAGAAATCTACTGCACAAGAGAATTATGAAGCCGAACCAGTTCTAAAACCACAAGTCACCCATGTCCGTCAACATACTTTTATCAAAGACCACTTTTTGGGCATTGGTAAATTATCCCTCCTTAGTTGGGTGCGTTCCTTCTTCAAGCAATTTTATGCATCTGTAACAAAATCAGATTATTTGATGTTACGACTTGGTTTCATTACGACACACTGTAGGGGAAACCCGAAGTTTAATTTTCACAAGTACATGATACGTTCACTTGAAGATGATTTCAAGCATGTCGTCGGTATCAGTTGGTGTTTTTGGATCTTCGTAATTGTCTTCTTGCTCCTTAATATTCATGGTTGGCATACATATTTCTGGATATCATTCGTTCCTCTTATCCTTCTGCTTGCTGTGGGAACAAAGCTGGAACATATTATAACCCAGCTGGCTCATGAAGTTGCAGAGAAGCATATACCAATAGAAGGTGATCTCATAATCCAACCATCCGACGATCACTTTTGGTTTCAGCGACCCCGTATTGTTCTCTTCTTGATTCATATTATACTTTTCCAAAATGCTTTCGAGATCGGATTCTTCTTCTGGATATTGGTTCAATATGGCTTCGACTCGTGTATCATGGGGGAAGTCTACTATATCATTCCAAGGCTTATTATTGGGGTGCTTGTTCAGGTTCTTTGCAGTTACAGCACCCTACCGCTCTACGCCATTGTCACACAGATGGGAAGCTCTTTCAAGAAAGCAATATTTGATGAACATATACAAGTAGGCCTAGTTGGATGGGCTCAAAAGGCAAAGAAAAAAAAGGGACAGAAAGCAGCAGCTTGTGGCTCCAGCCCAGGAAACAAGGAATCAGGTTCTATGGGAATTCAGCTGGGAAATATTCTGCGCATGGCATCTGCATCAGGAGAATTTAACCTTGAGGATTCCAAATCAAATGATATTCCTTAA 1350 40.52 MLMGFISLLLTVFQGAISKFCVPASLTEHLLPCSIEDKQKQTQKHNAGHGETEHFQTLFVSSISGTTRRLLAEESASQNGYCAQKNKVPLLSLEALHHLHIFIFILAIIHVTFCVLTVVFGGLRIRQWKHWEKSTAQENYEAEPVLKPQVTHVRQHTFIKDHFLGIGKLSLLSWVRSFFKQFYASVTKSDYLMLRLGFITTHCRGNPKFNFHKYMIRSLEDDFKHVVGISWCFWIFVIVFLLLNIHGWHTYFWISFVPLILLLAVGTKLEHIITQLAHEVAEKHIPIEGDLIIQPSDDHFWFQRPRIVLFLIHIILFQNAFEIGFFFWILVQYGFDSCIMGEVYYIIPRLIIGVLVQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHIQVGLVGWAQKAKKKKGQKAAACGSSPGNKESGSMGIQLGNILRMASASGEFNLEDSKSNDIP 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55886123 55901577 - Sed0027952.1 Sed01g3136 702440

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g3136 449 PANTHER MLO-LIKE PROTEIN 1 1 417 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed01g3136 449 Pfam Mlo family 1 417 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g3136 K08472 - - csv:101211868 723.776
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3136 Sed-Chr1:55886123 Sed04g2149 Sed-Chr4:35622715 2.40E-199 dispersed
Sed01g3136 Sed-Chr1:55886123 Sed09g0123 Sed-Chr9:962428 1.90E-236 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Sed03g0155 . 3 553 MLO family AT5G53760 68.6 1.3e-213 740.3
Sed11g1950 . 3 534 MLO family AT5G53760 70.6 1.6e-211 733.4
Sed04g3117 . 10 516 MLO family AT5G53760 72.3 3.5e-211 732.3
Sed04g3117 . 1 502 MLO family AT1G26700 72.2 2.2e-210 729.6
Sed03g0155 . 3 553 MLO family AT1G26700 67.8 7.9e-208 721.1
Sed11g1950 . 3 554 MLO family AT1G26700 67.5 8.1e-205 711.1
Sed04g2611 . 7 495 MLO family AT2G39200 67.8 5.5e-196 681.8
Sed07g2279 . 7 496 MLO family AT2G39200 66.4 2.7e-195 679.5
Sed01g0995 . 8 506 MLO family AT2G39200 66.1 1.0e-189 661.0
Sed05g2862 . 8 503 MLO family AT2G39200 67.1 3.2e-188 656.0
Sed05g2862 . 8 414 MLO family AT1G61560 68.0 1.4e-161 567.0
Sed01g0995 . 8 416 MLO family AT1G61560 67.0 2.1e-157 553.1
Sed04g2611 . 7 404 MLO family AT1G61560 65.7 6.8e-156 548.1
Sed07g2279 . 7 404 MLO family AT1G61560 64.5 5.1e-151 531.9
Sed14g1259 . 28 422 MLO family AT1G61560 52.7 2.6e-115 413.3
Sed10g0516 . 30 423 MLO family AT1G61560 51.5 1.7e-114 410.6
Sed08g1856 . 10 413 MLO family AT1G61560 50.5 2.7e-112 403.3
Sed10g0516 . 20 496 MLO family AT2G17430 63.8 2.9e-170 596.3
Sed14g1259 . 19 480 MLO family AT2G17430 62.6 1.1e-166 584.3
Sed02g0209 . 2 470 MLO family AT2G17430 61.7 1.0e-151 534.6
Sed08g1856 . 2 482 MLO family AT2G17430 57.8 7.3e-150 528.5
Sed04g1045 . 13 473 MLO family AT2G17430 60.9 2.8e-149 526.6
Sed01g0995 . 3 458 MLO family AT2G17430 51.8 2.1e-125 447.2
Sed02g0061 . 1 267 MLO family AT2G17430 60.5 2.8e-93 340.5
Sed14g1259 . 6 567 MLO family AT2G17480 62.8 2.5e-196 682.9
Sed10g0516 . 30 573 MLO family AT2G17480 63.1 2.9e-192 669.5
Sed04g1045 . 9 525 MLO family AT2G17480 61.1 2.5e-167 586.6
Sed02g0209 . 7 515 MLO family AT2G17480 62.3 1.2e-166 584.3
Sed08g1856 . 12 482 MLO family AT2G17480 61.6 6.5e-160 562.0
Sed01g0995 . 8 463 MLO family AT2G17480 52.2 9.5e-127 451.8
Sed05g2862 . 8 461 MLO family AT2G17480 51.5 3.6e-126 449.9
Sed02g0061 . 1 359 MLO family AT2G17480 55.4 1.1e-106 385.2
Sed08g1856 . 12 378 MLO family AT1G42560 62.8 3.1e-131 466.1
Sed14g1259 . 28 386 MLO family AT1G42560 58.7 5.5e-120 428.7
Sed10g0516 . 30 387 MLO family AT1G42560 58.7 2.1e-119 426.8
Sed04g1045 . 26 388 MLO family AT1G42560 56.1 6.8e-110 395.2
Sed02g0209 . 7 367 MLO family AT1G42560 56.0 3.4e-109 392.9
Sed01g0995 . 6 381 MLO family AT1G42560 50.4 8.1e-95 345.1
Sed02g0061 . 1 171 MLO family AT1G42560 52.3 6.2e-55 212.6
Sed04g2149 . 6 419 MLO family AT4G24250 53.2 3.7e-114 409.5
Sed09g0123 . 1 413 MLO family AT4G24250 53.5 2.9e-111 399.8
Sed01g3136 . 1 353 MLO family AT4G24250 52.6 8.0e-93 338.6
Sed10g0516 . 14 388 MLO family AT5G65970 65.6 6.5e-142 501.9
Sed14g1259 . 8 387 MLO family AT5G65970 64.2 7.9e-140 495.0
Sed02g0209 . 3 367 MLO family AT5G65970 66.0 4.8e-137 485.7
Sed04g1045 . 7 388 MLO family AT5G65970 63.6 3.4e-135 479.6
Sed08g1856 . 9 378 MLO family AT5G65970 59.0 8.2e-121 431.8
Sed01g0995 . 2 381 MLO family AT5G65970 51.3 9.2e-104 375.2
Sed05g2862 . 2 379 MLO family AT5G65970 50.8 5.9e-103 372.5
Sed02g0061 . 1 171 MLO family AT5G65970 64.3 2.4e-72 270.8
Sed08g1856 . 2 468 MLO family AT2G33670 66.7 2.3e-174 609.8
Sed10g0516 . 22 471 MLO family AT2G33670 61.3 8.8e-158 554.7
Sed14g1259 . 28 492 MLO family AT2G33670 60.4 8.8e-158 554.7
Sed04g1045 . 27 472 MLO family AT2G33670 56.5 1.2e-133 474.6
Sed02g0209 . 2 458 MLO family AT2G33670 54.9 1.4e-131 467.6
Sed05g2862 . 1 481 MLO family AT2G33670 50.2 5.9e-130 462.2
Sed01g0995 . 6 482 MLO family AT2G33670 50.5 1.9e-128 457.2
Sed02g0061 . 1 255 MLO family AT2G33670 53.7 1.9e-80 297.7
Sed04g2611 . 64 521 MLO family AT1G11310 63.7 2.0e-173 606.7
Sed07g2279 . 64 567 MLO family AT1G11310 59.0 1.6e-167 587.0
Sed05g2862 . 63 526 MLO family AT1G11310 62.7 3.5e-162 569.3
Sed01g0995 . 63 509 MLO family AT1G11310 64.4 3.5e-162 569.3
Sed14g1259 . 83 468 MLO family AT1G11310 50.7 3.6e-106 383.3
Sed08g1856 . 67 458 MLO family AT1G11310 51.6 2.3e-105 380.6
Sed04g2149 . 1 501 MLO family AT2G44110 59.3 1.8e-166 583.6
Sed09g0123 . 1 495 MLO family AT2G44110 59.2 1.3e-161 567.4
Sed01g3136 . 1 434 MLO family AT2G44110 56.8 2.7e-135 479.9
Sed04g2149 . 1 510 MLO family AT4G02600 70.1 1.5e-208 723.4
Sed09g0123 . 1 479 MLO family AT4G02600 73.3 1.9e-203 706.4
Sed01g3136 . 1 419 MLO family AT4G02600 69.4 8.1e-170 594.7
Sed04g1597 . 3 561 MLO family AT1G11000 67.0 3.2e-212 735.7
Sed04g0955 . 1 458 MLO family AT1G11000 54.5 3.6e-131 466.5
Sed04g0957 . 1 403 MLO family AT1G11000 54.1 3.7e-112 403.3
Sed04g0956 . 1 378 MLO family AT1G11000 54.5 9.9e-105 378.6
Sed04g2149 . 1 510 MLO family AT4G02600 70.1 1.5e-208 723.4
Sed09g0123 . 1 479 MLO family AT4G02600 73.3 1.9e-203 706.4
Sed01g3136 . 1 419 MLO family AT4G02600 69.4 8.1e-170 594.7
Sed04g2611 . 64 521 MLO family AT1G11310 63.7 2.0e-173 606.7
Sed07g2279 . 64 567 MLO family AT1G11310 59.0 1.6e-167 587.0
Sed05g2862 . 63 526 MLO family AT1G11310 62.7 3.5e-162 569.3
Sed01g0995 . 63 509 MLO family AT1G11310 64.4 3.5e-162 569.3
Sed14g1259 . 83 468 MLO family AT1G11310 50.7 3.6e-106 383.3
Sed08g1856 . 67 458 MLO family AT1G11310 51.6 2.3e-105 380.6
Sed04g1597 . 3 561 MLO family AT1G11000 67.0 3.2e-212 735.7
Sed04g0955 . 1 458 MLO family AT1G11000 54.5 3.6e-131 466.5
Sed04g0957 . 1 403 MLO family AT1G11000 54.1 3.7e-112 403.3
Sed04g0956 . 1 378 MLO family AT1G11000 54.5 9.9e-105 378.6
Sed08g1856 . 2 468 MLO family AT2G33670 66.7 2.3e-174 609.8
Sed10g0516 . 22 471 MLO family AT2G33670 61.3 8.8e-158 554.7
Sed14g1259 . 28 492 MLO family AT2G33670 60.4 8.8e-158 554.7
Sed04g1045 . 27 472 MLO family AT2G33670 56.5 1.2e-133 474.6
Sed02g0209 . 2 458 MLO family AT2G33670 54.9 1.4e-131 467.6
Sed05g2862 . 1 481 MLO family AT2G33670 50.2 5.9e-130 462.2
Sed01g0995 . 6 482 MLO family AT2G33670 50.5 1.9e-128 457.2
Sed02g0061 . 1 255 MLO family AT2G33670 53.7 1.9e-80 297.7
Sed05g2862 . 8 414 MLO family AT1G61560 68.0 1.4e-161 567.0
Sed01g0995 . 8 416 MLO family AT1G61560 67.0 2.1e-157 553.1
Sed04g2611 . 7 404 MLO family AT1G61560 65.7 6.8e-156 548.1
Sed07g2279 . 7 404 MLO family AT1G61560 64.5 5.1e-151 531.9
Sed14g1259 . 28 422 MLO family AT1G61560 52.7 2.6e-115 413.3
Sed10g0516 . 30 423 MLO family AT1G61560 51.5 1.7e-114 410.6
Sed08g1856 . 10 413 MLO family AT1G61560 50.5 2.7e-112 403.3
Sed10g0516 . 20 496 MLO family AT2G17430 63.8 2.9e-170 596.3
Sed14g1259 . 19 480 MLO family AT2G17430 62.6 1.1e-166 584.3
Sed02g0209 . 2 470 MLO family AT2G17430 61.7 1.0e-151 534.6
Sed08g1856 . 2 482 MLO family AT2G17430 57.8 7.3e-150 528.5
Sed04g1045 . 13 473 MLO family AT2G17430 60.9 2.8e-149 526.6
Sed01g0995 . 3 458 MLO family AT2G17430 51.8 2.1e-125 447.2
Sed02g0061 . 1 267 MLO family AT2G17430 60.5 2.8e-93 340.5
Sed14g1259 . 6 567 MLO family AT2G17480 62.8 2.5e-196 682.9
Sed10g0516 . 30 573 MLO family AT2G17480 63.1 2.9e-192 669.5
Sed04g1045 . 9 525 MLO family AT2G17480 61.1 2.5e-167 586.6
Sed02g0209 . 7 515 MLO family AT2G17480 62.3 1.2e-166 584.3
Sed08g1856 . 12 482 MLO family AT2G17480 61.6 6.5e-160 562.0
Sed01g0995 . 8 463 MLO family AT2G17480 52.2 9.5e-127 451.8
Sed05g2862 . 8 461 MLO family AT2G17480 51.5 3.6e-126 449.9
Sed02g0061 . 1 359 MLO family AT2G17480 55.4 1.1e-106 385.2
Sed08g1856 . 12 378 MLO family AT1G42560 62.8 3.1e-131 466.1
Sed14g1259 . 28 386 MLO family AT1G42560 58.7 5.5e-120 428.7
Sed10g0516 . 30 387 MLO family AT1G42560 58.7 2.1e-119 426.8
Sed04g1045 . 26 388 MLO family AT1G42560 56.1 6.8e-110 395.2
Sed02g0209 . 7 367 MLO family AT1G42560 56.0 3.4e-109 392.9
Sed01g0995 . 6 381 MLO family AT1G42560 50.4 8.1e-95 345.1
Sed02g0061 . 1 171 MLO family AT1G42560 52.3 6.2e-55 212.6
Sed10g0516 . 14 388 MLO family AT5G65970 65.6 6.5e-142 501.9
Sed14g1259 . 8 387 MLO family AT5G65970 64.2 7.9e-140 495.0
Sed02g0209 . 3 367 MLO family AT5G65970 66.0 4.8e-137 485.7
Sed04g1045 . 7 388 MLO family AT5G65970 63.6 3.4e-135 479.6
Sed08g1856 . 9 378 MLO family AT5G65970 59.0 8.2e-121 431.8
Sed01g0995 . 2 381 MLO family AT5G65970 51.3 9.2e-104 375.2
Sed05g2862 . 2 379 MLO family AT5G65970 50.8 5.9e-103 372.5
Sed02g0061 . 1 171 MLO family AT5G65970 64.3 2.4e-72 270.8
Sed03g0155 . 3 553 MLO family AT5G53760 68.6 1.3e-213 740.3
Sed11g1950 . 3 534 MLO family AT5G53760 70.6 1.6e-211 733.4
Sed04g3117 . 10 516 MLO family AT5G53760 72.3 3.5e-211 732.3
Sed04g2611 . 7 495 MLO family AT2G39200 67.8 5.5e-196 681.8
Sed07g2279 . 7 496 MLO family AT2G39200 66.4 2.7e-195 679.5
Sed01g0995 . 8 506 MLO family AT2G39200 66.1 1.0e-189 661.0
Sed05g2862 . 8 503 MLO family AT2G39200 67.1 3.2e-188 656.0
Sed04g2149 . 6 419 MLO family AT4G24250 53.2 3.7e-114 409.5
Sed09g0123 . 1 413 MLO family AT4G24250 53.5 2.9e-111 399.8
Sed01g3136 . 1 353 MLO family AT4G24250 52.6 8.0e-93 338.6
Sed04g3117 . 1 502 MLO family AT1G26700 72.2 2.2e-210 729.6
Sed03g0155 . 3 553 MLO family AT1G26700 67.8 7.9e-208 721.1
Sed11g1950 . 3 554 MLO family AT1G26700 67.5 8.1e-205 711.1
Sed04g2149 . 1 501 MLO family AT2G44110 59.3 1.8e-166 583.6
Sed09g0123 . 1 495 MLO family AT2G44110 59.2 1.3e-161 567.4
Sed01g3136 . 1 434 MLO family AT2G44110 56.8 2.7e-135 479.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000916 3 4 3 1 3 3 3 2 3 2 4 3 3 3 2 3 3 6 3 2 2 2 1 2 2 2 3 6 5 2 86