Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g3465 ATGGCTTCGGATCCCAAGGTTCTTCTGTTTGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGTTGGGTTGTAATCGCTGGGAAGGTTTATGATGTAACTCCTTTCATGGAGGATCACCCCGGAGGCGATGAAGTATTGTTGTCATCGACCGGAAAAGATGCCACGAACGATTTCGAAGATGTCGGGCACAGCGATTCAGCAAGAGAAATGATGGGCAAATATTACATAGGTGAAATTGATTCCTCAACAGTTCCTTTGAAGAAGATTTTCATTCCATCACAACAAACCCAGTACAAACAAGATAAGACACCTGAGTTTGTGTTAAAGATCTTGCAGATTCTGGTTCCCATTTTCGTTTTGGGTTTGGCCTTTGCTGTTCGACACTACACCAAGAATGAATGA 405 42.47 MASDPKVLLFEEVAKHNKTKDCWVVIAGKVYDVTPFMEDHPGGDEVLLSSTGKDATNDFEDVGHSDSAREMMGKYYIGEIDSSTVPLKKIFIPSQQTQYKQDKTPEFVLKILQILVPIFVLGLAFAVRHYTKNE 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 63773551 63776809 - Sed0001782.1 Sed01g3465 702769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g3465 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 87 IPR036400 -
Sed01g3465 134 Gene3D - 1 86 IPR036400 -
Sed01g3465 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Sed01g3465 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Sed01g3465 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Sed01g3465 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Sed01g3465 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Sed01g3465 134 PANTHER CYTOCHROME B5 6 132 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Sed01g3465 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Sed01g3465 134 SMART Cyt_b5_2 8 81 IPR001199 -
Sed01g3465 134 FunFam Cytochrome b5 type B 2 85 - -
Sed01g3465 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3465 Sed-Chr1:63773551 Sed05g0386 Sed-Chr5:2623399 2.60E-64 dispersed
Sed01g3465 Sed-Chr1:63773551 Sed01g3466 Sed-Chr1:63773551 3.30E-51 tandem
Sed01g3465 Sed-Chr1:63773551 Sed05g0385 Sed-Chr5:2623399 2.60E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g3465 K23490 - csv:101207109 250.366