Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed01g3466 | ATGGAGGATCACCCCGGAGGCGATGAAGTATTGTTGTCATCGACCGGAAAAGATGCCACGAACGATTTCGAAGATGTCGGGCACAGCGATTCAGCAAGAGAAATGATGGGCAAATATTACATAGGTGAAATTGATTCCTCAACAGTTCCTTTGAAGAAGATTTTCATTCCATCACAACAAACCCAGTACAAACAAGATAAGACACCTGAGTTTGTGTTAAAGATCTTGCAGATTCTGGTTCCCATTTTCGTTTTGGGTTTGGCCTTTGCTGTTCGACACTACACCAAGAATGAATGA | 297 | 42.42 | MEDHPGGDEVLLSSTGKDATNDFEDVGHSDSAREMMGKYYIGEIDSSTVPLKKIFIPSQQTQYKQDKTPEFVLKILQILVPIFVLGLAFAVRHYTKNE | 98 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 63773551 | 63776809 | - | Sed0001782.2 | Sed01g3466 | 702770 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed01g3466 | 98 | PRINTS | Cytochrome B5 signature | 32 | 44 | IPR001199 | - | |
Sed01g3466 | 98 | PRINTS | Cytochrome B5 signature | 19 | 26 | IPR001199 | - | |
Sed01g3466 | 98 | PRINTS | Cytochrome B5 signature | 4 | 18 | IPR001199 | - | |
Sed01g3466 | 98 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 1 | 44 | IPR001199 | - | |
Sed01g3466 | 98 | PANTHER | CYTOCHROME B5 | 1 | 96 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Sed01g3466 | 98 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 1 | 51 | IPR036400 | - | |
Sed01g3466 | 98 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 1 | 45 | IPR001199 | - | |
Sed01g3466 | 98 | Gene3D | - | 1 | 48 | IPR036400 | - | |
Sed01g3466 | 98 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed01g3466 | Sed-Chr1:63773551 | Sed05g0385 | Sed-Chr5:2623399 | 1.80E-43 | dispersed | |
Sed01g3465 | Sed-Chr1:63773551 | Sed01g3466 | Sed-Chr1:63773551 | 3.30E-51 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed01g3466 | K23490 | - | csv:101207109 | 181.03 |