Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g3759 ATGAGTTCCGGTGAAGATTGTTTGGGTTGGGCCGCCACAGATTCATCTGGCTTTTTATCTCCCTACAAATTCAGTCGCAGGGTTCCTGGAGATGATGATGTTTCAATTACAATAACACATTGCGGAGTTTGTTACGCAGATGTAATATGGACAAAAAATAAACACGGAGATGCAAAATATCCTTTGGTGCCCGGACAATGCGAATATTGTGAAGATGGTCAAGAAGTTATTTGCACGAGAGGATCCACTTTTACTTTTAATGCAATTGATGTTGATGGTACGATTACAAAGGGAGGGTATTCGAACTACATAGTCGTCCACGAGAGATACTGCTACAAAATACCTGGCAATTATCCATTAGCTTCAGCTGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATTCTCCAATGATTCGCCATAAGATGAATCAACCTGGCAAATCGCTTGGAGTGATTGGGCTTGGTGGTCTTGGCCACTTGGCTGTGAAGTTTGGGAAGGCGTTTGGACTGAATGTTACGGTTTTTAGCACTAGCATTTCCAAGAAAGAAGAAGCCTTGAGCGTTCTTGGAGCTGACAAATTTGTTATCTCATCTGAGAACGAGGAAATGGAGGCCTTGTCTAAGTCTCTTGACTTTATTATTGATGCTGCATCTGGTGATCACCCATTTGATCCATACATGTCTACTTTGAAGATTGGTGGCATTATGGTTTTGGTGGGGTTTCCTTCTCAAGTCAAGTTCAGTCCTGCAAGCCTAAATTTGGGTTTGAGAACCATTTCTGGTAGTGTAACTGGTGGCACTAAACTTACTCAAGAAATGCTTGATTTTTGTGCTGCTCATGGAATCTATCCAAACATAGAGGTGGTTCCAATTCAGTACTCTAATGAAGCAATCGAAAGGGTAATAAAGAACGACGTCAAGTACCGATTTGTAATCGATATCCAAGGCTCCCTAAAATGA 960 41.56 MSSGEDCLGWAATDSSGFLSPYKFSRRVPGDDDVSITITHCGVCYADVIWTKNKHGDAKYPLVPGQCEYCEDGQEVICTRGSTFTFNAIDVDGTITKGGYSNYIVVHERYCYKIPGNYPLASAAPLLCAGITVYSPMIRHKMNQPGKSLGVIGLGGLGHLAVKFGKAFGLNVTVFSTSISKKEEALSVLGADKFVISSENEEMEALSKSLDFIIDAASGDHPFDPYMSTLKIGGIMVLVGFPSQVKFSPASLNLGLRTISGSVTGGTKLTQEMLDFCAAHGIYPNIEVVPIQYSNEAIERVIKNDVKYRFVIDIQGSLK 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 66687275 66691941 + Sed0018975.2 Sed01g3759 703063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g3759 319 Pfam Zinc-binding dehydrogenase 156 278 IPR013149 -
Sed01g3759 319 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 IPR029752 -
Sed01g3759 319 Gene3D - 66 313 - -
Sed01g3759 319 SUPERFAMILY GroES-like 14 147 IPR011032 -
Sed01g3759 319 FunFam Cinnamyl alcohol dehydrogenase 129 284 - -
Sed01g3759 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 119 282 IPR036291 -
Sed01g3759 319 Gene3D - 10 65 - -
Sed01g3759 319 FunFam Putative cinnamyl alcohol dehydrogenase 6 285 314 - -
Sed01g3759 319 Gene3D - 129 284 - -
Sed01g3759 319 Pfam Alcohol dehydrogenase GroES-like domain 54 115 IPR013154 -
Sed01g3759 319 CDD CAD1 9 313 IPR047109 GO:0016616(InterPro)
Sed01g3759 319 PANTHER ALDEHYDE REDUCTASE 6 65 IPR047109 GO:0016616(InterPro)|GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3759 Sed-Chr1:66687275 Sed05g0637 Sed-Chr5:4650183 3.20E-161 dispersed
Sed01g3758 Sed-Chr1:66687275 Sed01g3759 Sed-Chr1:66687275 1.20E-182 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g3759 K00083 - csv:101211438 569.311