Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed01g3815 ATGGCTTTCATTCAACCCCATTTTCCATTAACCCTTCTTCTTCTTTTCTTTACAATGCCATTGCTCCGCCCCGCCGCCGCCGTCCCTCCGCCGCCGGCGGATTTAACCCCCCGGCTCTCCGATAAGGCTCCGGTCATTCCGGTCACCCATCTCGTCAAATTCTTCGAGCGCCTTCAAACCGTGGCCCTCAACGCATTCGGCGAAGTGGGTTTTGATCTCAAATACTACGTCGATTTGTCCCTCAAATTTGATTTGAAATCTACGATCAGAGCTTTCGATTCCCTTAAACGATCCCCAAATGGGTCTGTTCCGGCGGCGGATTTGAAGGCGTTTATAACAGATTATTTTCATGGTGCTGGATCCGATTTGGTGTATTCTGAGCCGGTGGATTTTGTGGCTCAGCCTCTAGGGTTTTTGCCGAAGGTTGAGAATGCGGAGGTTAGAGAATGGGGTTTGGATATTCATCGGTTTTGGAAGAATCTTAGCCGGAGAGTTTCCGACGATGTTGTTGTTCGGCCGGAATTTCATACTCTTTTGCCGTTGCCGGAGCCATGTGTTATTCCGGGATCCAGATTCCGGGAAGTTTACTATTGGGATTCTTATTGGATTATCAGAGGTTTGTTAGCTAGTAAAATGTATGAGACTGCTAAGGGAATTGTTGTCAATCTCATTTCAATGATTGATAAGTTTGGCCATGTTTTGAATGGTGCAAGAGTTTATTACACTAATAGAAGTCAACCTCCCCTCTTGAGTTCCATGGTTTATGACATATACCTTAGAACAAAGGACTTAGGGTTTGTGAGGAATGCACTCCCAGCTTTGATCAAAGAACATATGTTTTGGAATTCAGGATTCCATTCAATTACTGTTCAGAATGCTTCTGGTGGGACTCATTCTTTGTCTAGGTATTACGCAATGTGGAACGAGCCGCGGCCCGAATCTTCCTTGCTGGATGAGAAAGTTGCTTCAAAGTTTGTAAATAACTACGAAAAGCAGCATCTATACCGAGAAATCGCATCAGCCGCGGAATCTGGCTGGGATTTCAGTACAAGATGGATGAGGGATCACTCTGACTTATCTACGTTGGCTACAACTTCAATCTTGCCAGTTGATCTAAATGTATTCATACTCAAGATGGAACTTGACATTTCCAATTTAGCTAGAGTAGTTGGAGATGATAGAAATGCAGAGCTCTTTTTGGAGGCTTCTCTACTCAGAAAGAAGACAATCAACTCTATTTTTTGGAATTCAGAGAAGGGACAATGGCTTGATTACTGGCTTGATGATGGCTCCTCCAAGGGTGTTCATACGTGGGATGTCCGGAACCAGAATCAGGACATATATGCTTCGAACTTCATTCCGTTGTGGATCGAATCGTTCTACTCCGATAGTGAACAGATGAAGAAAGTTCTGAAAAGTTTTCAGAACTCGGGCTTGCTGTGCAATGCCGGGATCGCAACTTCAGTAATCAACTCAGGAGAGCAATGGGATTTCCCGAATGGTTGGGCGCCGATTCAGCACATGATCATCGAGGGATTGGCGAGATCCGAATTGAAAGAAGCAAAGGCATTGGCCAAGGATATCGCTACGAGATGGCTCCGGACCAACTATGTAGCTTACAAGAAAACAGGATATATGCATGAGAAATATGATGTTCAAAAGTGTGGAGACTTTGGTGGAGGAGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAACGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCTGAAGATCAAAAGATAGACTGCTACTAA 1788 44.69 MAFIQPHFPLTLLLLFFTMPLLRPAAAVPPPPADLTPRLSDKAPVIPVTHLVKFFERLQTVALNAFGEVGFDLKYYVDLSLKFDLKSTIRAFDSLKRSPNGSVPAADLKAFITDYFHGAGSDLVYSEPVDFVAQPLGFLPKVENAEVREWGLDIHRFWKNLSRRVSDDVVVRPEFHTLLPLPEPCVIPGSRFREVYYWDSYWIIRGLLASKMYETAKGIVVNLISMIDKFGHVLNGARVYYTNRSQPPLLSSMVYDIYLRTKDLGFVRNALPALIKEHMFWNSGFHSITVQNASGGTHSLSRYYAMWNEPRPESSLLDEKVASKFVNNYEKQHLYREIASAAESGWDFSTRWMRDHSDLSTLATTSILPVDLNVFILKMELDISNLARVVGDDRNAELFLEASLLRKKTINSIFWNSEKGQWLDYWLDDGSSKGVHTWDVRNQNQDIYASNFIPLWIESFYSDSEQMKKVLKSFQNSGLLCNAGIATSVINSGEQWDFPNGWAPIQHMIIEGLARSELKEAKALAKDIATRWLRTNYVAYKKTGYMHEKYDVQKCGDFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQKIDCY 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 67327741 67333005 - Sed0019208.1 Sed01g3815 703119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed01g3815 595 SUPERFAMILY Six-hairpin glycosidases 69 587 IPR008928 GO:0005975(InterPro)
Sed01g3815 595 PRINTS Glycosyl hydrolase family 37 signature 410 426 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 PRINTS Glycosyl hydrolase family 37 signature 300 317 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 PRINTS Glycosyl hydrolase family 37 signature 488 504 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 PRINTS Glycosyl hydrolase family 37 signature 230 248 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 PRINTS Glycosyl hydrolase family 37 signature 335 352 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 PRINTS Glycosyl hydrolase family 37 signature 367 384 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 PRINTS Glycosyl hydrolase family 37 signature 568 581 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 Pfam Trehalase 72 585 IPR001661 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 ProSitePatterns Trehalase signature 2. 495 504 IPR018232 GO:0004555(InterPro)|GO:0005991(InterPro)
Sed01g3815 595 Gene3D - 57 593 IPR012341 GO:0005975(InterPro)
Sed01g3815 595 PANTHER TREHALASE 64 594 IPR001661 GO:0004555(PANTHER)|GO:0004555(InterPro)|GO:0005991(InterPro)|GO:0005993(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed01g3815 K01194 - csv:101208719 970.689