Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed02g0028 | ATGTTTCAATGCATAGCATGTACCAACCAGAAAGACGACGGGGGGGAGGACGGGGCTACGCGTGGGACCCCCGCGGCGCCCACTACAAAGGAAGCCGTCAAAAGCCTCACAACGCAGATTAAGGACATGGCTTTGAAATTCTCTGGGGCTTATAAGCAGTGCAAACCTTGCACAGGCTCCAGTAGCTACAAGAAAGGACAGAGACCTTACCCAGATTTTGACACGGCTTCAGAAGGGGTTCCATACCCGTACATAGGAGGGGCAAGTGCAAGTTCAACCCCTGCCTGGGACTTCCCTCCCGTGAATCGGCACCCGCATACGAGATCCGACTCGAGATTCAAAGGGGTGTTCAGAGGAGACCAGACCCCTGGGGCCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGCAGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGGGGCAATGATTTAAAGCGAATTCGTTTCGATCGAGAAATGTTCAACAAATGGCAAGCTCAGCGATGGTGGGGCGAGAACTATGACAGAATAACGGAGCTCTATAATGTTCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACGGAGGAAGAGAGGGATTCTTCTTACTCAAAGATGGGAAGAGATAGTCCAATGACTTCGGCGCCGAAAAACTACAAACCTTCTGGAAGTAAAGGTTATTTTCCATCTGACCAGCACTTTGATCATGGAAGTGGCCATCCCTATGCAGGGTCAAGTGCCTATCCAGCAGGCGGCGCAAAAGGCGACATACCTTCTATGGAAGCATCACGCACAACTACCTCTTCGAGAGACGAACCTTCGATTTCCATTAGCAATGCAAGCGACATCGAGGCGGAATGGGTAGAGGAAGATGAACCAGGGGTCTATATAACAATCAGGCAGCTTGTTGATGGTACTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAGATTTGGGGAGATGAACGCGAAGCAATGGTGGGAACATAACAGAGAGAGAATCCAAGCTCAATACCTATAA | 1071 | 49.95 | MFQCIACTNQKDDGGEDGATRGTPAAPTTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHTRSDSRFKGVFRGDQTPGADSTISACDVVLEDEQKEWMAQVEPGVHITFVSLPNGGNDLKRIRFDREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEEERDSSYSKMGRDSPMTSAPKNYKPSGSKGYFPSDQHFDHGSGHPYAGSSAYPAGGAKGDIPSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMNAKQWWEHNRERIQAQYL | 356 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4416114 | 4420673 | - | Sed0021466.1 | Sed02g0028 | 703696 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed02g0028 | 356 | Pfam | Transcription factor BRX N-terminal domain | 27 | 57 | IPR027988 | - | |
Sed02g0028 | 356 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 300 | 355 | IPR013591 | - | |
Sed02g0028 | 356 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 141 | 195 | IPR013591 | - | |
Sed02g0028 | 356 | MobiDBLite | consensus disorder prediction | 222 | 236 | - | - | |
Sed02g0028 | 356 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 1 | 356 | IPR044532 | - | |
Sed02g0028 | 356 | MobiDBLite | consensus disorder prediction | 276 | 294 | - | - | |
Sed02g0028 | 356 | ProSiteProfiles | BRX domain profile. | 141 | 196 | IPR013591 | - | |
Sed02g0028 | 356 | MobiDBLite | consensus disorder prediction | 12 | 31 | - | - | |
Sed02g0028 | 356 | ProSiteProfiles | BRX domain profile. | 301 | 356 | IPR013591 | - | |
Sed02g0028 | 356 | MobiDBLite | consensus disorder prediction | 97 | 124 | - | - | |
Sed02g0028 | 356 | MobiDBLite | consensus disorder prediction | 202 | 294 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g0028 | Sed-Chr2:4416114 | Sed02g0030 | Sed-Chr2:4416114 | 7.80E-185 | dispersed | |
Sed02g0028 | Sed-Chr2:4416114 | Sed02g0029 | Sed-Chr2:4416114 | 1.40E-210 | tandem | |
Sed02g0028 | Sed-Chr2:4416114 | Sed04g0896 | Sed-Chr4:8084261 | 2.50E-183 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed02g0028 | - | - | - | 0.0 |