Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed02g0030 | ATGGCTTTGAAATTCTCTGGGGCTTATAAGCAGTGCAAACCTTGCACAGGCTCCAGTAGCTACAAGAAAGGACAGAGACCTTACCCAGATTTTGACACGGCTTCAGAAGGGGTTCCATACCCGTACATAGGAGGGGCAAGTGCAAGTTCAACCCCTGCCTGGGACTTCCCTCCCGTGAATCGGCACCCGCATACGAGATCCGACTCGAGATTCAAAGGGGTGTTCAGAGGAGACCAGACCCCTGGGGCCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGCAGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGGGGCAATGATTTAAAGCGAATTCGTTTCGATCGAGAAATGTTCAACAAATGGCAAGCTCAGCGATGGTGGGGCGAGAACTATGACAGAATAACGGAGCTCTATAATGTTCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACGGAGGAAGAGAGGGATTCTTCTTACTCAAAGATGGGAAGAGATAGTCCAATGACTTCGGCGCCGAAAAACTACAAACCTTCTGGAAGTAAAGGTTATTTTCCATCTGACCAGCACTTTGATCATGGAAGTGGCCATCCCTATGCAGGGTCAAGTGCCTATCCAGCAGGCGGCGCAAAAGGCGACATACCTTCTATGGAAGCATCACGCACAACTACCTCTTCGAGAGACGAACCTTCGATTTCCATTAGCAATGCAAGCGACATCGAGGCGGAATGGGTAGAGGAAGATGAACCAGGGGTCTATATAACAATCAGGCAGCTTGTTGATGGTACTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAGATTTGGGGAGATGAACGCGAAGCAATGGTGGGAACATAACAGAGAGAGAATCCAAGCTCAATACCTATAA | 945 | 48.89 | MALKFSGAYKQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHTRSDSRFKGVFRGDQTPGADSTISACDVVLEDEQKEWMAQVEPGVHITFVSLPNGGNDLKRIRFDREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEEERDSSYSKMGRDSPMTSAPKNYKPSGSKGYFPSDQHFDHGSGHPYAGSSAYPAGGAKGDIPSMEASRTTTSSRDEPSISISNASDIEAEWVEEDEPGVYITIRQLVDGTRELRRVRFSRERFGEMNAKQWWEHNRERIQAQYL | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4416114 | 4418496 | - | Sed0021466.3 | Sed02g0030 | 703698 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed02g0030 | 314 | MobiDBLite | consensus disorder prediction | 180 | 194 | - | - | |
Sed02g0030 | 314 | ProSiteProfiles | BRX domain profile. | 259 | 314 | IPR013591 | - | |
Sed02g0030 | 314 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Sed02g0030 | 314 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 1 | 314 | IPR044532 | - | |
Sed02g0030 | 314 | MobiDBLite | consensus disorder prediction | 234 | 252 | - | - | |
Sed02g0030 | 314 | MobiDBLite | consensus disorder prediction | 160 | 252 | - | - | |
Sed02g0030 | 314 | ProSiteProfiles | BRX domain profile. | 99 | 154 | IPR013591 | - | |
Sed02g0030 | 314 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 99 | 153 | IPR013591 | - | |
Sed02g0030 | 314 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 258 | 313 | IPR013591 | - | |
Sed02g0030 | 314 | MobiDBLite | consensus disorder prediction | 55 | 82 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g0028 | Sed-Chr2:4416114 | Sed02g0030 | Sed-Chr2:4416114 | 7.80E-185 | dispersed | |
Sed02g0030 | Sed-Chr2:4416114 | Sed04g0896 | Sed-Chr4:8084261 | 1.40E-164 | dispersed | |
Sed02g0029 | Sed-Chr2:4416114 | Sed02g0030 | Sed-Chr2:4416114 | 8.70E-185 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed02g0030 | - | - | - | 0.0 |