Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0061 ATGACACTTGGAAGGGTAAAGATTCGAGGCTGGAAGGAGTGGGAGCAGGAAACTTCAACCCATAACTATGAGTTTTTCAATGATCCTGCAAGATTTAGGCTTACTCATGAGACATCTTTTGTGAAAGCACACACAAGCTTTTGGACACGCCTTCCTTTCTTCTTCTATATTGGCTGCTTCTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCCGATTACTTGACGCTACGCAACGGATTCATAACAGTTCATTTAGCACCAGGAAGTAAATTTAACTTCCAAAGATATATCAAGAGGTCATTAGAAGATGACTTCAAGGTAGTAGTTGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTTCTTAATGTATATGGATGGCGGACCTTGCTCTGGGCATCATTTATCCCTCTGATTGGAATTCCCCTCGTGCAAGGATCGGATAAATATTTCTGGTTCGGTCGACCTCAACTGATTCTTCATCTCATGCATTTTGCTTTATTTCTGAATGCATTCCAGACCACCTTTATTTTAGCTGCACTGCATTCGTTTGGGTCGAATTCTTGCTTGTCTGATGGTTTCATCTCTACCATAATAAAAGTTGGTTTAGGGGCTGCAACATTATTTCTATGCAGCTACGTTACGCTTCCGATATACGCCCTTGTAACTCAGATGGGGTCGGGCATGAAGAAGTCCATCTTTGACGAACACACATCAAAGGCGCTCAAGAAATTGCATGAAACAGCCAAGAAGAAGCTGGTTCAACGAGCCTCAATAACTAAAACACTCGGAGGTGGTTCAATTGCTTCACCTTTGCGGTCTTTCAGACGCTCATTGCGACGGTTCAAAACTACAGGACACTCCATGTGTGTGCCTATAAATGAGGATCTTGAGTCATCTGATTACGAGAGTGATCCATTAGCAATCCTTACACAAGTATCAGTTACGGAGTCGATTAATGTTGATGTTGATAGCGATGAAATACAGGAAATTGCTGAAGCAGACCAACCTCAGAGCACAGAGCAAAGTAAAGAAGGAGATGAGTTCTCATTTATAAAGCCTGGACCAGAGAAATAA 1086 42.27 MTLGRVKIRGWKEWEQETSTHNYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNVYGWRTLLWASFIPLIGIPLVQGSDKYFWFGRPQLILHLMHFALFLNAFQTTFILAALHSFGSNSCLSDGFISTIIKVGLGAATLFLCSYVTLPIYALVTQMGSGMKKSIFDEHTSKALKKLHETAKKKLVQRASITKTLGGGSIASPLRSFRRSLRRFKTTGHSMCVPINEDLESSDYESDPLAILTQVSVTESINVDVDSDEIQEIAEADQPQSTEQSKEGDEFSFIKPGPEK 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6745476 6749137 - Sed0023417.1 Sed02g0061 703729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0061 361 Pfam Mlo family 143 264 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed02g0061 361 Pfam Mlo family 1 142 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed02g0061 361 PANTHER MLO-LIKE PROTEIN 1 1 143 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Sed02g0061 361 MobiDBLite consensus disorder prediction 335 361 - -
Sed02g0061 361 MobiDBLite consensus disorder prediction 343 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0061 Sed-Chr2:6745476 Sed02g0209 Sed-Chr2:34503770 3.20E-178 dispersed
Sed02g0061 Sed-Chr2:6745476 Sed14g1259 Sed-Chr14:21668597 4.60E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0061 K08472 - csv:116402632 577.785