Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0070 ATGGAGAGGAGGTTGCTTTACAAAGAACTGGTGCCATTTGCCGCAATGGTTGCGGCGGAGTGCGCCACCGTGGGCTCGAACACAGGCTTCAAAGCTGCCACCGCCAGAGGCATCAGCTACTACGTTTTCACCCTCTTTGTCTGCATCACCGCTGCCCTCGTCCTCCTCCCTTTTGCTTTCATCTTTCACAGATCGCAAGAGCTTCCTTCCAACAAAATTTCCTTTTTCTTCAAAATGGTTTGCCTCTCCGCCCTCGGGCTTTCATGCCAGTTGCTTGGGAACAAAGGGTTAGAGTACAGCTCACCAACTCTTTCATCCGCCATTAGCAACCTTATTCCAGCTTTCACTTTCATTCTTGCTGTTTTTTTCGGGATGGAAAAGATAGTACTGAAAAGGAGGAGCAGCATAGCCAAAATTGTGGGGTCTGCAGTGTCCATAACAGGTGCATTGGTGGTGGTTTTGTACAAAGGCCCAATTGTCATATCAAACCCATATTCTCAAGGCCCAAAAGAGCCTTTCAGCTCTTCACATCCACAGCCCAATTGGGTATTAGGTGGCCTTTGCTTTGTTTTTCAATACCTTTCCAACTCCTTTTGGTACATTCTTCAGACCCAAATCATAAAACTATACCCAGATGAGCTAACTGTGGTGGCAGTGTACTACGCTATCCAGGCAGTTTTAACTGCGCCTGTGTGTTTGTTAGCAGAAACAGACATGAACGCTTGGAAGCTAAGAAATGCACAGAGTTTTCTTCTAATATTGAACTCGGGTATGATGGGTCAGTCTTTTGTAGCTGCAATCCATACTTGGGGACTGAGCTTGAAGGGCCCAGTTTATGTGTCCAGTTTCAGGCCATTGTCCATTGCCATTGCAGCTGCTACGGGTGCCGTTCTCCTTGGTGATGATCTTCATCTTGGAAGCTCCTTCAACTCCACTTTCTTCTCTCATAAGTCTTCTCTGCTCTTGAGCCTGTAG 975 46.97 MERRLLYKELVPFAAMVAAECATVGSNTGFKAATARGISYYVFTLFVCITAALVLLPFAFIFHRSQELPSNKISFFFKMVCLSALGLSCQLLGNKGLEYSSPTLSSAISNLIPAFTFILAVFFGMEKIVLKRRSSIAKIVGSAVSITGALVVVLYKGPIVISNPYSQGPKEPFSSSHPQPNWVLGGLCFVFQYLSNSFWYILQTQIIKLYPDELTVVAVYYAIQAVLTAPVCLLAETDMNAWKLRNAQSFLLILNSGMMGQSFVAAIHTWGLSLKGPVYVSSFRPLSIAIAAATGAVLLGDDLHLGSSFNSTFFSHKSSLLLSL 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 8622739 8651513 + Sed0023646.1 Sed02g0070 703738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0070 324 PANTHER WAT1-RELATED PROTEIN 14 313 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Sed02g0070 324 Pfam EamA-like transporter family 23 153 IPR000620 GO:0016020(InterPro)
Sed02g0070 324 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0070 Sed-Chr2:8622739 Sed11g1944 Sed-Chr11:33783997 1.50E-65 dispersed
Sed02g0070 Sed-Chr2:8622739 Sed06g0579 Sed-Chr6:5049782 1.20E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0070 - - - 0.0