Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0083 ATGGTAAAAAATTTAGTCAGCTGCTCAAAATTTAGGGAAAGGTACAGCAAGTGTCATCTTACCCTCAATTCACATGCTCTCTGCTCCCGCTCAAGGATTGGAGGTTCCATCGTCAAATTCAAAGTAATACAAAATTGTACTCACTCCAGTCAAGTCCAATCCAATCCCTTTCCCATGGATGTCTGTAGCATTGCCCACAAGCTCGACCTTTCGAACCTCGAAACAGTCATCCGGAAAGCTTGGGAATTTCGCCCCCTCTCCGATCTTCATTTCAGTTCTTCTGCCATGGGCGTTGGGGAGGTTTGCAAGGCCATAATCTGTTTGGAAATTGCGGCCATAAGATTAAGGACACTTTTTGATAAATCAAGTGCAATCAAGTTAAGTGGGATGTCAGAGAAGGCGTATACCAGATCCTTCAATTGTTTGCAGAAAATTCTTGGATTCAAAAATAGGCTGGATATTAGAGAATTGGCTGTGCAGTTTGGGTGTGTTAGGCTAGTTTCTTCAGTCCAAAAGGGCTTATCTGTATACAAGGATCGGTTTGTTGCATCACTGCCAGCTTCTCGACAAGCTAGTGCTGACTTTTCTCAACCGGTATTTACGGCTGTAGCCTTCTACTTGTGTGCAAAAAAACTCAAGGTTGACAAAGTTAAGTTCATTGAACTCAGTGGTACCTCTGAGTCTGAATTCTCAACAGGTTCTACTTCTATGAAGGATTTGTGCTTCGATGTCTTTGGGATTTCTAGTGAAAAGAAAGATCTCAGGGAAGCCAAAGGGAACCGAGACCTATTAGACTCGTTGCCAGAAAAAAGGAAACTTGAGGATGGCGGTTATTTATCAGACGATGGCAAAGAGTTTCCAAGATCAAAACGAAGCAAGCCAATGGGTGAACAAGCCTATAATCAGTGGAAATCCTCAGTCATTGCTTCTAATCACCCAAAGACAAAAGTTCTTGGCAAGCGAACCAGACAAACTTCCCTTCACTTGTTTAAGGAAAATAAAGAAACAGATGATAAGTTGGAGGAGAGTGGCAAATGTGGCAGTGATTAA 1050 42.38 MVKNLVSCSKFRERYSKCHLTLNSHALCSRSRIGGSIVKFKVIQNCTHSSQVQSNPFPMDVCSIAHKLDLSNLETVIRKAWEFRPLSDLHFSSSAMGVGEVCKAIICLEIAAIRLRTLFDKSSAIKLSGMSEKAYTRSFNCLQKILGFKNRLDIRELAVQFGCVRLVSSVQKGLSVYKDRFVASLPASRQASADFSQPVFTAVAFYLCAKKLKVDKVKFIELSGTSESEFSTGSTSMKDLCFDVFGISSEKKDLREAKGNRDLLDSLPEKRKLEDGGYLSDDGKEFPRSKRSKPMGEQAYNQWKSSVIASNHPKTKVLGKRTRQTSLHLFKENKETDDKLEESGKCGSD 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10289748 10305183 + Sed0021592.1 Sed02g0083 703751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0083 349 Pfam ORC6 second cyclin-like domain 152 240 IPR054113 -
Sed02g0083 349 Gene3D - 150 244 - -
Sed02g0083 349 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 59 317 IPR020529 GO:0005664(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Sed02g0083 349 Pfam Origin recognition complex subunit 6 (ORC6) 63 148 IPR008721 GO:0003677(InterPro)|GO:0005664(InterPro)|GO:0006260(InterPro)
Sed02g0083 349 CDD Orc6_mid 151 244 - -
Sed02g0083 349 MobiDBLite consensus disorder prediction 295 312 - -
Sed02g0083 349 MobiDBLite consensus disorder prediction 274 292 - -
Sed02g0083 349 MobiDBLite consensus disorder prediction 325 349 - -
Sed02g0083 349 MobiDBLite consensus disorder prediction 274 349 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0083 Sed-Chr2:10289748 Sed06g1123 Sed-Chr6:31970625 2.90E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0083 K02608 - csv:101204841 429.869