Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0150 GACATTAGTAACAACTCATTTGATTCATCGATAGCTCCGAATTGGTTCTCAAATCTACAACTACTTACCACTCTGGTTGCTGAACATGGGTCAATTCAAGGACCTGTACCACAAGGAGTCTTTAGCTTGCAACAAATACAACAAATAAAACTGAAGAACAATTCTCTCAATGGGACATTAGATATGGGTTACAAAATTAGTCAACAGTTGCAGCTGGTCGATTTGCAAAGTAACAATATCTTTGAATTCACCAGTGGTCCAAAATATACCAAAACTTTGATGCTACTAGGGAATCCTGTGTGTAGTGATGGTACCCTCTCAACTATGAACTATTGCCAGCTTCAAGGACATAATATGAAGTCTTATTTTACAAGCCTTTTTATGTGTGGAAATAAGCAGTGTCCTTCTGATGAGAAATTAAACCCTCAGAGTTGTGAATGTGCCTACCCATTAGAAGGAACTTTATACTTTAGAGCACCCCCGTTAAGGGAATTATCCAATGCCACTTTGTTTAACATACTGGAATCATTTCTTTGGACCAAGCTGGAGCTTACACCTGGTTCAGTTTCAATTCAATCTCCTTTCTTTAATGTTGACGATTATCTTCAGATGAATGTTTCTCTTTTTCCACCAAACGGAAAGTATTTTAGCAGGTTGGATATTCTGAGGATTGGGTTTGAATTGAATCATCAAACTTCCAAACCTCCCCAAGAGTTTGGGCCATTTTATTTCATTGCATCTTCCTACTGTTTTTCAGACATGGATGAGACAACTTCAACAAGGATTGGATTGATCATTGGTGTAGCTATTGGTTGTGTCTTTCTCATTCTTGGCTTCATTGGAGTTGGAATATATGCGATTCTCCAAATAAAACATGCAAAAAAGGCTATTGGATTGAGTCAGCCATTCGCATATTGGGAACCAAGTGGAAATGATAGCGGAGGTGCACCACGATTGAAGGGAGCTAGATGGTTTTCTTATGATGAACTTAGAAAATGCACAAATAATTTCTCCATCAGAAATGAGATAGGAACTGGAGGATATGGCAAGGTATATCGAGGAATTTTTTTGGATGGACAAATAGTTGCAATCAAAAGGGCTCAACAAGGATCAAAGCAGGGCAGCCTTGAGTTCAAGACAGAAATTGAACTACTTTCACGAGTTCATCACAAGAATCTTCTTGGCCTTGTAGGATTTTGTTTTGAACAAGGAGAACAAATGCTTGTTTATGAATTTATGCCTAATGGAACACTGAGAGATAGCCTATCTGGTAAGTTTCCTCAAATCTGTTGA 1293 38.21 DISNNSFDSSIAPNWFSNLQLLTTLVAEHGSIQGPVPQGVFSLQQIQQIKLKNNSLNGTLDMGYKISQQLQLVDLQSNNIFEFTSGPKYTKTLMLLGNPVCSDGTLSTMNYCQLQGHNMKSYFTSLFMCGNKQCPSDEKLNPQSCECAYPLEGTLYFRAPPLRELSNATLFNILESFLWTKLELTPGSVSIQSPFFNVDDYLQMNVSLFPPNGKYFSRLDILRIGFELNHQTSKPPQEFGPFYFIASSYCFSDMDETTSTRIGLIIGVAIGCVFLILGFIGVGIYAILQIKHAKKAIGLSQPFAYWEPSGNDSGGAPRLKGARWFSYDELRKCTNNFSIRNEIGTGGYGKVYRGIFLDGQIVAIKRAQQGSKQGSLEFKTEIELLSRVHHKNLLGLVGFCFEQGEQMLVYEFMPNGTLRDSLSGKFPQIC 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31378103 31379981 - Sed0003637.2 Sed02g0150 703818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0150 430 PANTHER RECEPTOR-LIKE PROTEIN 55 1 423 - -
Sed02g0150 430 ProSiteProfiles Protein kinase domain profile. 337 430 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed02g0150 430 Pfam Protein tyrosine and serine/threonine kinase 339 423 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed02g0150 430 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524(InterPro)
Sed02g0150 430 SUPERFAMILY Protein kinase-like (PK-like) 316 426 IPR011009 -
Sed02g0150 430 Gene3D Ribonuclease Inhibitor 1 148 IPR032675 -
Sed02g0150 430 Gene3D Phosphorylase Kinase; domain 1 311 412 - -
Sed02g0150 430 SUPERFAMILY L domain-like 1 104 - -
Sed02g0150 430 FunFam Leucine-rich repeat protein kinase family protein 307 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0150 Sed-Chr2:31378103 Sed04g1067 Sed-Chr4:15291957 4.00E-167 dispersed
Sed02g0149 Sed-Chr2:31375784 Sed02g0150 Sed-Chr2:31378103 6.30E-230 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78769 PF07714 PK_Tyr_Ser-Thr 1.40E-14 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0150 - - - 0.0