Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0213 ATGGAAGGTCATCATTTTCATTCCTTTGTTCAGCTCCACCTCCAGCAACAGCAGCAGCTTCAACATCCGCCACAGCACCTCCACCGGAACCTAGCCGTCGCCGACGACCAAACCCCCGCCGGCGCCGGCGAAAAATTCCCTCAATGGAGCATTCAGGAAACAAAGGAGTTTCTGGTGATCAGAGGCGAGCTGGATCAGACGTTCATGGAGACCAAAAGAAACAAGCTCTTGTGGGAAATCACTGCCTCCAAAATGAACCAAAAGGGTTTCCATCGCACCGCTGAACAGTGTAAATCTAAATGGAAAAACCTCGTTACCCGTTTTAAGGGTTGTGAAACAATAGAGCCAGAAGTTTCAAGGCAGCAGTTTCCATTCTACACAGAACTGCAAGCAATTTTCGGGGCAAGAATGCAGCGAATATTATGGGCAGAAGCGGAGAGCAGCGGGAGCAAGTCGAAGAAGAAGATGATGGTGTTATCGTCGGATGAAGACGAAGAAAACGAGGACAGCCATGGGGACGGAGGCAATACAAAAGGCGGTAGTAAGGGGAGGAAGAAGGGTAAAGGAAGTGTTGGAGCTACGGCAGGCAACAGCGGGGGAAGCAGTAGTTTCAATCATTTGAAAGAAGTATTGGAAGATTTCATGAACCAACAAATACAAATGGAGATTCAATGGAGGGAGGCATTTGAAGCAAGGGAAAAGGAGAGGGAAATGAGGGAAATGGAGTGGAGAAGGAACATGGAAGCTTTAGAACATGAGAGGATAATGTTTGAAACAAGATGGAGTGAAAGAGAAGAACAAAGAAGAATGAGAGAGGAAGTTAGGGCTGAGAAAAGAGATGCTTTAATCACAGCTTTGTTAAACAAAATTAGAAGAGATGATCATATGTAG 891 46.13 MEGHHFHSFVQLHLQQQQQLQHPPQHLHRNLAVADDQTPAGAGEKFPQWSIQETKEFLVIRGELDQTFMETKRNKLLWEITASKMNQKGFHRTAEQCKSKWKNLVTRFKGCETIEPEVSRQQFPFYTELQAIFGARMQRILWAEAESSGSKSKKKMMVLSSDEDEENEDSHGDGGNTKGGSKGRKKGKGSVGATAGNSGGSSSFNHLKEVLEDFMNQQIQMEIQWREAFEAREKEREMREMEWRRNMEALEHERIMFETRWSEREEQRRMREEVRAEKRDALITALLNKIRRDDHM 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34689560 34691534 - Sed0021500.1 Sed02g0213 703881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0213 296 MobiDBLite consensus disorder prediction 152 204 - -
Sed02g0213 296 PANTHER FI21293P1 25 292 - -
Sed02g0213 296 ProSiteProfiles Myb-like domain profile. 49 105 IPR001005 -
Sed02g0213 296 Pfam Myb/SANT-like DNA-binding domain 48 132 IPR044822 -
Sed02g0213 296 FunFam Zinc finger and SCAN domain-containing 20 49 110 - -
Sed02g0213 296 CDD GT1 47 112 - -
Sed02g0213 296 Gene3D - 49 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0213 Sed-Chr2:34689560 Sed03g2503 Sed-Chr3:32263902 3.70E-39 dispersed
Sed13g0759 Sed-Chr13:5409255 Sed02g0213 Sed-Chr2:34689560 5.60E-21 transposed
Sed02g0213 Sed-Chr2:34689560 Sed04g1155 Sed-Chr4:23598843 3.90E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
37489 PF13837 Myb_DNA-bind_4 1.40E-18 CL0123 Sed TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0213 - - - 0.0