Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed02g0256 | ATGGGAGTGGCCAAATCTCCTAATAAGTGCAACACTGTTGGAGTTCAAGGCATTGCTTGGGCCTTTGGTGGCATGATCTTTGCTCTTGTTTATTGCACTGCTGGTATTTCAGGTGGTCACATAAATCCAGCCGTGACGTTCGGGCTATTACTGGCGAGAAAGCTCTCCCTAACAAGGGCAATTTTCTACATCATAATGCAGTGCATAGGCGCCATCGGTGGAGCCGCAGTCGTGAAAGCCTTCGAGAAGGGGCAATTTGAAAGGCTCGGAGGCGGAGCCAACACCGTCAATGCTGGCTATGCCGAAACACAAGGCCTCGGAGCTGAAATCATGGGCACATTTCTGCTTGTTTACACGGTCTTTTCCGCCACCGATGCAAAGCGAAACGCCAGAGATTCCCATGTTCCTATGTTGGCTCCTTTACCCATTGGATTCGCAGTGTTTTTGGTGCATTTGGCCACCATTCCGGTCACCGGAACCGGTATTAATCCGGCCAGAAGTCTCGGCGCCGCCCTTATTTATAACCGCCACCAAGCCTGGCATGACCATTGGGTGTTCTGGGCAGGGCCGTTGATCGGGTCAGCACTTGCAGCTCTGTACCATCAGACGGTGATCAGGGCGATACCATTCAAGTCTAAATGA | 642 | 51.71 | MGVAKSPNKCNTVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAIFYIIMQCIGAIGGAAVVKAFEKGQFERLGGGANTVNAGYAETQGLGAEIMGTFLLVYTVFSATDAKRNARDSHVPMLAPLPIGFAVFLVHLATIPVTGTGINPARSLGAALIYNRHQAWHDHWVFWAGPLIGSALAALYHQTVIRAIPFKSK | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 37672131 | 37677613 | - | Sed0018095.1 | Sed02g0256 | 703924 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed02g0256 | 213 | Gene3D | Glycerol uptake facilitator protein. | 1 | 212 | IPR023271 | - | |
Sed02g0256 | 213 | FunFam | Putative aquaporin PIP-type 7a | 78 | 209 | - | - | |
Sed02g0256 | 213 | PRINTS | Major intrinsic protein family signature | 108 | 126 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed02g0256 | 213 | PRINTS | Major intrinsic protein family signature | 184 | 204 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed02g0256 | 213 | PRINTS | Major intrinsic protein family signature | 144 | 166 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed02g0256 | 213 | PRINTS | Major intrinsic protein family signature | 22 | 46 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed02g0256 | 213 | PRINTS | Major intrinsic protein family signature | 59 | 78 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed02g0256 | 213 | CDD | MIP | 14 | 204 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed02g0256 | 213 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 212 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
Sed02g0256 | 213 | SUPERFAMILY | Aquaporin-like | 11 | 205 | IPR023271 | - | |
Sed02g0256 | 213 | Pfam | Major intrinsic protein | 10 | 201 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Sed02g0256 | 213 | ProSitePatterns | MIP family signature. | 40 | 48 | IPR022357 | - | |
Sed02g0256 | 213 | NCBIfam | MIP family channel protein | 10 | 201 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g0256 | Sed-Chr2:37672131 | Sed07g2554 | Sed-Chr7:41078724 | 6.10E-100 | dispersed | |
Sed02g0256 | Sed-Chr2:37672131 | Sed04g3846 | Sed-Chr4:46838222 | 2.70E-84 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed02g0256 | K09872 | - | rcu:8269391 | 366.696 |