Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0277 ATGGAGATCCTACCGAGCCTCGACGTTCCGGTTTTCATTGCTGTCGCTGCGGCCCTGCTAGCCATTGCTGCTGGTGCTGTTTTCCTCTTCTCCTCCACAAAACCAGCATCTAGAGGCTGCTTGGATCCTGAGAACTTCAAAGAGTTTAAGCTCATTAAGCGCACCAAGCTGAGCCATAATGTGGCGAGGTTCACTTTTGCACTTCCCAAGCCCGATTCAATTCTTGGTCTTCCTACTGGAAAGCATTTAAGTTGCAGGGGAAAAGATAGCAAAGGTGAAGAGGTTATTAGATCTTACACCCCTATTACTTTGGATTCTGATGTTGGATATTTTGAACTAGTCATAAAGATGTATCCCCAAGGAAGGATGTCGCATCATTTTCGAGAAATGCGTATCGGGGACCATCTTGCTGTAAAGGGACCAAAGGGAATTTTTAAGTATCAACCTGGACAAGTTCGAGCATTTGGAATGCTTGCTGGAGGCTCTGGAATTACACCTATGTACCAAGTCACTCGAGCTATATTAGAGAACCCGAACGACAAGACAAAAGTTCACCTTATTTACGCCAATGTTACACTTGAAGATATACTTTTAAAGGAAGAATTGGATCTTCTTGCCGAAAGATACCCTGACCGCTTCAAAGTCTACTATGTATTGAGCAAGCCTCCTAAAGTTTGGAATGGTGGCAGTGGCCATATCTCAAAGGAAATGATTCAAGCCCATTGCCCTGCACCTTCCTCTGACATTCAGATTCTACGATGCGGTCCGCCACCGATGAACAAGGCCATGGCTGCTCACCTTGATGCTCTTAAGTATGCACCTGAAATGCAGTTTCAATTTTAA 843 44.72 MEILPSLDVPVFIAVAAALLAIAAGAVFLFSSTKPASRGCLDPENFKEFKLIKRTKLSHNVARFTFALPKPDSILGLPTGKHLSCRGKDSKGEEVIRSYTPITLDSDVGYFELVIKMYPQGRMSHHFREMRIGDHLAVKGPKGIFKYQPGQVRAFGMLAGGSGITPMYQVTRAILENPNDKTKVHLIYANVTLEDILLKEELDLLAERYPDRFKVYYVLSKPPKVWNGGSGHISKEMIQAHCPAPSSDIQILRCGPPPMNKAMAAHLDALKYAPEMQFQF 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38384357 38403603 + Sed0010585.1 Sed02g0277 703945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0277 280 Gene3D - 139 280 IPR039261 -
Sed02g0277 280 Pfam Oxidoreductase NAD-binding domain 157 263 IPR001433 GO:0016491(InterPro)
Sed02g0277 280 PRINTS Cytochrome B5 reductase signature 156 175 - -
Sed02g0277 280 PRINTS Cytochrome B5 reductase signature 97 104 - -
Sed02g0277 280 PRINTS Cytochrome B5 reductase signature 75 86 - -
Sed02g0277 280 PRINTS Cytochrome B5 reductase signature 194 205 - -
Sed02g0277 280 PRINTS Cytochrome B5 reductase signature 250 258 - -
Sed02g0277 280 PRINTS Cytochrome B5 reductase signature 133 147 - -
Sed02g0277 280 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 44 148 IPR017927 GO:0016491(InterPro)
Sed02g0277 280 PANTHER NADH-CYTOCHROME B5 REDUCTASE 22 280 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Sed02g0277 280 FunFam NADH-cytochrome b5 reductase 138 280 - -
Sed02g0277 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 194 205 IPR001709 GO:0016491(InterPro)
Sed02g0277 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 156 175 IPR001709 GO:0016491(InterPro)
Sed02g0277 280 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 250 258 IPR001709 GO:0016491(InterPro)
Sed02g0277 280 SUPERFAMILY Riboflavin synthase domain-like 41 149 IPR017938 -
Sed02g0277 280 CDD cyt_b5_reduct_like 49 280 - -
Sed02g0277 280 Gene3D Translation factors 39 138 - -
Sed02g0277 280 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 136 276 IPR039261 -
Sed02g0277 280 Pfam Oxidoreductase FAD-binding domain 49 147 IPR008333 -
Sed02g0277 280 FunFam NADH-cytochrome b5 reductase 39 138 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0277 Sed-Chr2:38384357 Sed03g2083 Sed-Chr3:14969593 2.20E-121 dispersed
Sed02g0277 Sed-Chr2:38384357 Sed10g1434 Sed-Chr10:30517212 7.10E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0277 K00326 - csv:101212931 469.544