Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0364 ATGGAAATGGACTCTAAGAAGCATCTCAGTCGCAAGCAGTGTTCCTACGAGTTATCGGATGAGCAGTTTAGGGTTCATAAGGAGACGTACAGTGGGCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGCTGAGAATCATTCTCCATTCACTTGTCTCTAAGTGGAAACCTCATTTACCTGTTAGGACTGTATTGGGGTTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACTCTCTACAAGCACATGAAACTTAAGCCCACCATTCTGGATGAGTATTCAAAGGAGAAATCTGCCACCCCACTTGTTGAGCCGCATAACTTTATGCACCCAGATGATCATCTTGTTTTGGAAGATGAAAGTGGGAGAGTCAAGCTTTCTGGGGCTGTTCTTATACCTTCTGTATACGTTACAGGGATAATAATTGCATTGCATGGAAAGGAAACTAGTGTTGGTGACTTTTTGGTTTTGGACATCCTAGATGCTGACTTGCCACCCCAGATAGAGCGGCCACTCATATCAAGCGAAGATAAGTACGTGGTTTTTGTGTCGGGTCTAAGTATTGGGAGCAGTATCTGTAATCCTCTACAGTTTCAGCTCCTTATTGATCATATAACAGGACATTTAGGGGATATAAAGGAACAAGGGATTGCAGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCTGTTGAAATTCCTCATGCAGTTTTAAATGGGCAGCATTTGTCTGCAAAGGATCAAACAAAGCTGACAGAATCGCTTAAAGAGCTAGATATCCTTTTGAACCAGCTTGCTGCAGGTTTACCTGTAGATATCATGCCAGGTTCCAGTGACCCAGCTAATTTTGCTTGGCCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCCTATAACACTTTCAGATCTTGCACCAACCCTCATTGTTTTGAGCTTGATAATTTCAGGTTAGTCAATAATCAGCCTAACAGGACAATTGACTCAACCACAGTTCAATTCGTGGTTCTCTGGTTTCAGGTTTCTTGGAACATCAGGTCAGAACATAGATGA 1065 42.72 MEMDSKKHLSRKQCSYELSDEQFRVHKETYSGQQYSHIYFARLHLLRIILHSLVSKWKPHLPVRTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKEKSATPLVEPHNFMHPDDHLVLEDESGRVKLSGAVLIPSVYVTGIIIALHGKETSVGDFLVLDILDADLPPQIERPLISSEDKYVVFVSGLSIGSSICNPLQFQLLIDHITGHLGDIKEQGIAAQIVHVVICGNSVEIPHAVLNGQHLSAKDQTKLTESLKELDILLNQLAAGLPVDIMPGSSDPANFAWPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRLVNNQPNRTIDSTTVQFVVLWFQVSWNIRSEHR 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40475793 40482342 + Sed0018995.3 Sed02g0364 704032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0364 354 Gene3D - 41 166 - -
Sed02g0364 354 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 5 322 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
Sed02g0364 354 Pfam DNA polymerase alpha/epsilon subunit B 182 323 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Sed02g0364 354 Gene3D - 169 333 - -
Sed02g0364 354 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0364 Sed-Chr2:40475793 Sed12g1248 Sed-Chr12:8927128 1.40E-162 dispersed
Sed02g0363 Sed-Chr2:40475793 Sed02g0364 Sed-Chr2:40475793 2.50E-187 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0364 K02328 - csv:101221438 581.637