Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0545 ATGGAAATTGCTTTTCTTCTTCACCCAATTTTGTTCCTTTTATTCATCTTTCTAATCATCTTCTTCTTAAAGCCCAAATTTCTGTGCAACTGCGAAATTTGCCAAGCTTATTTAACTTCATCTTGGTCGAAAAATTTCATCAACCTCTGCGATTGGTACGCCCATCTTCTCCGGCAATCGCCGACGAAGACGATCCACATCCACGTCTTACGGAACACGATCACGGCGAATCCCGACAACGTCGAATACATCCTCAAAACCAAATTCCAAAACTACCCAAAAGGAAAGACCTTCTCTTCAATTCTTGCCGATTTTTTGGGCCGAGGAATTTTCAACGTGGACGGCGATTTGTGGCGGTTCCAGAAGAAAATGGCGATTCTCGAACTGGGTCGGCAGTCGATTCGATCCTACTGCTTTGAAATCGTTTGCCACGAGATTCATTCCCGGCTCTTGCCGCTGCTCTCGTCGGCGGCCGGCGGCTGCGGTGTGGTGGATTTGCAAGACGTGTTTAATAGGTTTGCTTTTGATGTTATTTGTAAGTTCTCGTTTGGGTTGGATCCGAGATGCTTGGAGCTGTCTCTTCCGATGACGGATTTCGCCGTCGCTTTCGACGTTGCGGCGAAGCTTTCTGCTCGGAGAGCCATGGCGGCGCCGCCGTTCATCTGGAAAATCAAGCGGACGCTTAATTTAGGTAGCGAGAGGAAACTGAAAAAAGCAATAAAGCTAATAAACATGTTAGCTGGAGAAGTAATCCGACAGCGAAGAAAACTAGGAGGAATAATCTCAAACCACAACGATCTGCTTTCTCACTTCATGCAAACCGTCTCCGATGAAACTTACCTACGAGACATTGTCGTGAGCTTCCTGCTGGCCGGTCGCGACACCGTCGCCTCCGCCTTGACCAGCTTCTTCTACCTCCTCTCCGCCCATCCCCACGTCGACTCCGCCATCCACCTCGAATCCAACCGGCTCATCGGCCCCGACACCGACCCCACAAACTTCGACCAAACCCGACACCTTCATTACTTACACGCCGCCATTTTCGAGTCCATGAGACTCCTCCCGCCAATTCAATTCGACTCTAAGTTTTGTGAGGACGACGACGTTTTGCCCGATGGGACTTTCGTCCGACGTGGAACTCGGGTCACTTACCACCCCTACGCCATGGGTCGGGTTGAGGATATCTGGGGCCCGGACTGCCTTGAGTTTGACCCCGCTCGGTGGCTGAGACATGGTGTCTTCTGCCCCGAGAACCCATTTAAGTACCCCGTTTTTCAAGGCGGGCTTCGGTTTTGTTTGGGGAAGGAAATGGCGCTGCTTGAGTTGAAAATGGTTGTGCTTTCGGTTGTTCGTCGGTTTCGCTTTCGGTCGGTTACGCCGTGTGTGGCGCCTCGATTCTCCCCTAGCCTCACCGCTACATTCTCCGGCGGGTTTCGGGTTTTTGTAAGTGAGAAGAATAAGAAAGACGGGTAG 1473 50.85 MEIAFLLHPILFLLFIFLIIFFLKPKFLCNCEICQAYLTSSWSKNFINLCDWYAHLLRQSPTKTIHIHVLRNTITANPDNVEYILKTKFQNYPKGKTFSSILADFLGRGIFNVDGDLWRFQKKMAILELGRQSIRSYCFEIVCHEIHSRLLPLLSSAAGGCGVVDLQDVFNRFAFDVICKFSFGLDPRCLELSLPMTDFAVAFDVAAKLSARRAMAAPPFIWKIKRTLNLGSERKLKKAIKLINMLAGEVIRQRRKLGGIISNHNDLLSHFMQTVSDETYLRDIVVSFLLAGRDTVASALTSFFYLLSAHPHVDSAIHLESNRLIGPDTDPTNFDQTRHLHYLHAAIFESMRLLPPIQFDSKFCEDDDVLPDGTFVRRGTRVTYHPYAMGRVEDIWGPDCLEFDPARWLRHGVFCPENPFKYPVFQGGLRFCLGKEMALLELKMVVLSVVRRFRFRSVTPCVAPRFSPSLTATFSGGFRVFVSEKNKKDG 490
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 43006251 43009906 + Sed0024137.1 Sed02g0545 704213
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0545 490 CDD CYP86A 61 478 - -
Sed02g0545 490 SUPERFAMILY Cytochrome P450 48 482 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 Gene3D Cytochrome P450 41 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0545 490 PANTHER CYTOCHROME P450 28 477 - -
Sed02g0545 490 Pfam Cytochrome P450 71 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0545 Sed-Chr2:43006251 Sed03g1890 Sed-Chr3:12820473 1.30E-169 dispersed
Sed02g0545 Sed-Chr2:43006251 Sed08g0036 Sed-Chr8:169980 1.40E-115 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0545 K20624 - csv:101207686 764.222