Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed02g0549 | ATGAATTTCAAAATGCTCAAAGCCTTTATCTCATTCATTTTTATTTTCGCCGCCGTGGCCTCCTCCACCCAAATTCACAGAAAGGCTTATGTTGTGTATATGGGAGCATTGCCAAAACTGCAGAGCCATGAGCTTCTTTCAGATCATCATCACAGCCTTTTGGCTAATGCAGTTGGAAATGAGGAATTGGCGAAAAAAACCAAGATTTATAGCTATGGAAGGAGCTTCAATGGATTTGCTGCAAGGCTATTGCCCCATGAAGCAAAGAAACTAGCAAAGGAAAAAAGAGTGGTGTCAGTATTTCGGAGCAAGATGAGGAAATTGCAAACGACAAGATCGTGGGATTATTTGGGGCTGTCGGAGGCGGCGAGCCGCCGTAACGCCGCCGCAGAATCTAACGTCATTGTCGGAGTTTTCAACGACCATGGCTACGGCCCAATTCCTTCTAGGTGGAAGGGTGAATGTGTAATTGCCCATAACTTCACCGGCTGTAACAGGAAAGTGATCGGCGCTCGGTACTTCAACCTGGAAAATGCAGACGACACAGTAAACCAAAGCCCTGTGGACGAGTTAGGCCACGGCTCCCACTGTGCCTCCACTGTGGCCGGCACCGCCGTGAGAGGCGCCAGCTTCTATGGCGTAGCAAAAGGTACCGCACGCGGCGGCGTCCCCGCAGCGAGAATTGCAATGTACAAAGTGTGCTGGAGTGTAGGCTGCACGGACACGGACCTGCTGGCAGGATTCGACCACGCAATCGCTGACGGAGTCGACATATTGTCGGTGTCTGTCGGAGGCGCTGCGCCAGTGTTCTTCGAGGACCCGATTGCAATCGGGTCGTTTCACGCGATGGAGAAAGGGATATTGACGAGTTGCGCCGCCGGGAATGACGGGCCGGAGGTGAAGACGGTGGAGAATGTGGCGCCGTGGATAATGACGGTGGCGGCTTCTACCGTTGATAGAGATTTCAGTACCCTTCTTGTGTTGGGTAATAATAACAAAGTTGCTGGAGAATCAATAAATACATTTTCACCAAAGAAGAAGATGTACCCTCTCATCACTGGAACACAGGCAGCACTATCCCAAGACGATCCAGGGGCTAAGTGGTGTGATGATGGGACTCTTGACAAGAAAAAGGTGTTAGGGAAAATTGTGTATTGTTTGGGAGCTTATTCTCAAGAGCCCATAATCTCTGGGCTTGGTGGTGTTGGAGTTATTGTAAATCTCCTGAATTCTCCTGAAACTGCTATCACCACTCCCATTCCGTCCACACATATTTCCTATCAAGATTCTAGTGTTATTGAAGCCTACCTCAACTCCACCAAGAATCCTCAAGCAGTGATAATGAAAACAACCACAAAGAAAACAAAGGCTCCTTTTTTGGCATACTTTTCTTCAAGAGGTCCTCAGGGCGTAGCTCGTGATATCCTCAAGCCTGATATTACAGCACCGGGGGAGAACATATTAGCGGCATTCACGAAACTGGCAACAATTCCAAAAGACAGACATTCAGTTTTTAGCATTATGTCTGGAACTTCAATGGCATGTCCTCACGGCGCCTCCGCGGCTGCCTTTCTCAAAACTTTCCACCCGACTTGGTCACCTGCCGCCATCAAGTCCGCCCTCATGACCACCGCAACACCATTAAAGATCGAAGAAGAAGGAGAGGAGCTCGGCGCCGGTGCTGGCCAAATAAACCCGATGAAGGCCATACATCCCGGCCTCGTTTTCGACCTCACTCCCAAATCATACCTCTCATTCCTTTGCTCCAAACTTAACTACTCGGGCACCGCCCTGGCCATCCTCGCCGGTGACACGTCCTTCAACTGCTCCGCCAACCCGCCGCCCGCCGGCTCCGACGGCCTCAACTACCCCACCATGTACGCCCCGGTTAACTGGGACGCCACCAACGTCTCTGCCGTGTTCCACCGCATCGTGACCCACGTCGGTTTCGGGCCGTCAACTTATAAGGCAAAGATCAAGTCGCCGCGGGGTCTGAGGGTGAACGTGTGGCCGCATACTTTGGTGTTCGGCCGGGCGTATGAGAAACGGTCGTTTAAGGTTACGGTGAAAGGGGCGGTGTCCGAGGAGGAGGACGTTGTTTTGAAGGCTGAGCTTGTGTGGGATGATTCTAAGCATTATGTTAGGATCCCTATCTTGGTTTCTAGAGTTTAG | 2172 | 51.01 | MNFKMLKAFISFIFIFAAVASSTQIHRKAYVVYMGALPKLQSHELLSDHHHSLLANAVGNEELAKKTKIYSYGRSFNGFAARLLPHEAKKLAKEKRVVSVFRSKMRKLQTTRSWDYLGLSEAASRRNAAAESNVIVGVFNDHGYGPIPSRWKGECVIAHNFTGCNRKVIGARYFNLENADDTVNQSPVDELGHGSHCASTVAGTAVRGASFYGVAKGTARGGVPAARIAMYKVCWSVGCTDTDLLAGFDHAIADGVDILSVSVGGAAPVFFEDPIAIGSFHAMEKGILTSCAAGNDGPEVKTVENVAPWIMTVAASTVDRDFSTLLVLGNNNKVAGESINTFSPKKKMYPLITGTQAALSQDDPGAKWCDDGTLDKKKVLGKIVYCLGAYSQEPIISGLGGVGVIVNLLNSPETAITTPIPSTHISYQDSSVIEAYLNSTKNPQAVIMKTTTKKTKAPFLAYFSSRGPQGVARDILKPDITAPGENILAAFTKLATIPKDRHSVFSIMSGTSMACPHGASAAAFLKTFHPTWSPAAIKSALMTTATPLKIEEEGEELGAGAGQINPMKAIHPGLVFDLTPKSYLSFLCSKLNYSGTALAILAGDTSFNCSANPPPAGSDGLNYPTMYAPVNWDATNVSAVFHRIVTHVGFGPSTYKAKIKSPRGLRVNVWPHTLVFGRAYEKRSFKVTVKGAVSEEEDVVLKAELVWDDSKHYVRIPILVSRV | 723 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 43058682 | 43066110 | + | Sed0004179.1 | Sed02g0549 | 704217 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed02g0549 | 723 | Pfam | Subtilase family | 171 | 560 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Sed02g0549 | 723 | ProSitePatterns | Serine proteases, subtilase family, histidine active site. | 193 | 203 | IPR022398 | - | |
Sed02g0549 | 723 | CDD | Peptidases_S8_3 | 107 | 546 | IPR034197 | - | |
Sed02g0549 | 723 | CDD | PA_subtilisin_like | 326 | 447 | - | - | |
Sed02g0549 | 723 | Gene3D | - | 587 | 723 | - | - | |
Sed02g0549 | 723 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 16 | 109 | IPR037045 | - | |
Sed02g0549 | 723 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 113 | 570 | - | - | |
Sed02g0549 | 723 | Pfam | Peptidase inhibitor I9 | 30 | 109 | IPR010259 | - | |
Sed02g0549 | 723 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 30 | 718 | IPR045051 | - | |
Sed02g0549 | 723 | Gene3D | Peptidase S8/S53 domain | 138 | 583 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed02g0549 | 723 | SUPERFAMILY | Subtilisin-like | 108 | 574 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Sed02g0549 | 723 | PRINTS | Subtilisin serine protease family (S8) signature | 189 | 202 | IPR015500 | - | |
Sed02g0549 | 723 | PRINTS | Subtilisin serine protease family (S8) signature | 509 | 525 | IPR015500 | - | |
Sed02g0549 | 723 | Pfam | Fibronectin type-III domain | 621 | 720 | IPR041469 | - | |
Sed02g0549 | 723 | FunFam | Subtilisin-like protease SBT5.3 | 18 | 109 | - | - | |
Sed02g0549 | 723 | Gene3D | - | 319 | 453 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g0549 | Sed-Chr2:43058682 | Sed06g0199 | Sed-Chr6:1500298 | 1.20E-171 | dispersed | |
Sed10g1120 | Sed-Chr10:12871406 | Sed02g0549 | Sed-Chr2:43058682 | 2.80E-216 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed02g0549 | - | - | - | 0.0 |