Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0572 ATGGAGTTTGAAATTGCAGCTTTCATTCTAGTTTCCTTCCTCTGGGGCTTGTGGGTGTGGCGCCGCCGTGGTTCGGCGGCGTCGGGGCGGCTTCCGCCAGGGCCACGGCGGTGGCCTGTGGTCGGAAACCTGCTCCAACTCGACTCCTCCGCGCACACATCCTTCACAAAACTGGCCGCCCAACACGGCCCGATCATGACCGTCCACCTCGGGTCCATGACGACGGTGGTGGTGTCGACGAGCACGGCGGCGCGGGAGATGTTCAAGACCAACGACGCGCCGCTGTCGGGGCGCATGATATACGAGGCGATGAAAGGGAACCGCGGCATGGAAGGCTCCCTCATCGCCTCCCAGTACGGGCCCCACTGGCGGATGCTGCGGCGGCTGGCGACGACCGAGCTCTTCGTCGGCAGCCGCCTCGACGCCATGGGGCACGTGAGGAGGCGGTGCGTGGACGCCATGGTGCGGTTCGTGGCGGAGGAGGCAACCAAACGCGGTGGCGCGTGCGAACACCCGCCGACGATCGACTTGGGGCGGTTTTTCTTCCTGATGGGGTTTAATTTAATCGGGAATCTGATATTTTCGAAGGATCTTTTGGACCCGAACTCGAAACGGGGGAATGGGTTTTACTTCCACGCCCGGAAGGTGATGGAGCTGGCCGGAAAGCCGAACGTGGCGGACTTTCTGCCGGGGCTCCGGTGGGTCGACCCGCAGGGGATAAGGAGGAAAACCCAGTTCCATGTGGACAGAGCGTTTGAAATTGCTGGGGAGTTTATAAAGGAGAGATTAAAGGAGAAAGAAATGGAAGACAAAAAAGATGGGAAAAAGGATTATTTGGATGTTCTTTTGGAGTTCCGTGGCGATGGCGTCAACGAATCTTCTCGATTCTCTTCTTGGATTATCAACGTTATCGTCCTCGAGATGTTCACGGCGGGGACGGACACAACCACCAGCACACTAGAATGGGCAATGGCGGAGCTCCTCCACAACCCGGTGGCGCTACACAAACTTCAGGCGGAGCTCCGATCAAAAATCCCACCCGACGGCAACTTAGAAGAGTGCCATCTCCAAAGCCTCCCATACCTGGACGCCGTCGTGAAAGAAACCCTCCGCCTCCACCCGCCGCTGCCGTTCCTGTTCCCGAGGATGGCGATGAAGCCCTGCACCGTCCTCGGCTATGGCATCCCGGCAGAAACCCAAGTCCTCGTCAACGTTTGGGCCATCGGCCGGGACCCCGACAACTGGAAAAACGCTTCTGCTTTCTCGCCGGAGAGATTCTTGGGCGGCGGCGGAATGGACTTCAAAGGTCAACACTTTGACTTCATTCCGTTCGGGTCCGGGCGCCGCATGTGCCCCGCGGTGCCGCTGGCTTCGAGGGTTCTTCCAATGGCGTTGGGGTCGTTGGTTCTGCTGTTTGATTGGAGTCTGCCGGACGGAATGTCGCCGGAGGAGATGGACATGTCGGAGCAAATGGGGATTACTCTTAGGAAGAAAATTCCTTTGATGGCCATTCCTACTCTTCATAATCGTGGTTGA 1536 58.46 MEFEIAAFILVSFLWGLWVWRRRGSAASGRLPPGPRRWPVVGNLLQLDSSAHTSFTKLAAQHGPIMTVHLGSMTTVVVSTSTAAREMFKTNDAPLSGRMIYEAMKGNRGMEGSLIASQYGPHWRMLRRLATTELFVGSRLDAMGHVRRRCVDAMVRFVAEEATKRGGACEHPPTIDLGRFFFLMGFNLIGNLIFSKDLLDPNSKRGNGFYFHARKVMELAGKPNVADFLPGLRWVDPQGIRRKTQFHVDRAFEIAGEFIKERLKEKEMEDKKDGKKDYLDVLLEFRGDGVNESSRFSSWIINVIVLEMFTAGTDTTTSTLEWAMAELLHNPVALHKLQAELRSKIPPDGNLEECHLQSLPYLDAVVKETLRLHPPLPFLFPRMAMKPCTVLGYGIPAETQVLVNVWAIGRDPDNWKNASAFSPERFLGGGGMDFKGQHFDFIPFGSGRRMCPAVPLASRVLPMALGSLVLLFDWSLPDGMSPEEMDMSEQMGITLRKKIPLMAIPTLHNRG 511
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 43374439 43378692 - Sed0004147.1 Sed02g0572 704240
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0572 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed02g0572 511 CDD CYP76-like 59 505 - -
Sed02g0572 511 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 506 - -
Sed02g0572 511 Pfam Cytochrome P450 32 496 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 SUPERFAMILY Cytochrome P450 28 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 FunFam Cytochrome P450 76C4 23 504 - -
Sed02g0572 511 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0572 511 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g3628 Sed-Chr1:65522747 Sed02g0572 Sed-Chr2:43374439 2.50E-85 dispersed
Sed02g0572 Sed-Chr2:43374439 Sed05g0854 Sed-Chr5:6803491 2.70E-90 dispersed
Sed02g0572 Sed-Chr2:43374439 Sed05g0156 Sed-Chr5:948975 2.50E-99 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0572 - - - 0.0