Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0586 ATGGACACAACTTCAAGAACAGGGAATTTGGAGCCAATGCTCTTGAAAATAGGCATTCCTCTAGCTCTATCAGCAGCTGGTGGAGTATGTGCCATAACGATGGCAACAGGTTCATTTCCAGCCTCCTTAAACCCTTTCAAACCCAAATCAAAACCCATTAAAAATGACAACTTTGACAGCCAAAATCACTCAACTCCACTTTCTTTGGAGGTTGATGAAGTTCTTTCAAGCTTAAGAACCAGAGTTGAAGATCTTGAAAGAAAAGAAATGGAGATAGAGAAGCAATTTGTTTGGTACCAAAATTTGAAAGAGAGAGAAACTTTGCTAATGGAGTTGAAGAACACATTGGTTTTGGATATGGCTCATATAAGTTTCTTGGAAAAGGAGATATTGTTAATGGAAGAAGAAAGCAAGAGGTTTGAGAGTTTGGTAACAGAATATTTGGGAGTTTCAGAGCAGCTTGAAGGGCATAAAACAGAAAACAAGTTGCTTGAAAGAGAAGTAAAGAGACTTAAGAAGAGATTGAAGGAACAATCAAAGATTATAAGAGAGAAGAACTTGAAGATTGAAGAAAGTAAAACAGAGCTTTGGAGAAATAATGGAGAAATGGATACAAAGAAAAAGATGATAGAGAAGTTGGGGAATGAAGTAAGAGAGCTCAAAATGCAAATGGATCAATTGCAAGAGGAGGAGGAGAAGAGAGCTTCATCCTCATTCAAGATCGAAGAAGAAAAACAAGTAAGAATGGAGGATTTCAACAAGCTTTCGAACGAATTCAATCAATTGAAAGAAGAATTTGAGGTTTTAAAAAACCAAGAACAAAAACAGCAAGGCCAGAAAGAAAATGATGAGGAAGCAGAAAGAAAGAACAAAGCTTTGGATCAAAATGAATCCTCATTATGTGATCAAACTAAAAGCACAATGCCAAAGCTTCTTCAAAGGATAAGCTGTGTTGGGAGAAATTTGAGTAGAAATAGGCTTAAATTTCATAAACAAAAAATAAAAAACCAAATGGTTATCAAACGAGACCTTATAGGAAATTTGAGTGAAAATAGGTTTAAATTTCAAAAACCAAAAACCAAAAACCAAATGATATCAAACGGGTCTAATGGATTGAAATTTGGACATTATTATTGTCAGGCTTCATTGACATCCACACCACATGGTAAGCTATGGCCTTTGAGGTACTATGACTTGAAGATTGGAGAAGGACTGATGGAATCCAATTCTGGTCCTCAGAAAAATTACTCTCTGCTTCAATATGCCCTCACTTCCCCCATTAAATTTTTACTTCTCTATTTGCTTTATCAAAAAAAAAAAAAAATCTTATTCATAGATTTCATTGATATTTTAAAAGTTTACTATGTGGCTAAATGGAGAGGGATCACATTCATGACAAGTAAACAAGGGCTTGGTCCTTATGGATTTGATGTAGGCCAATCAGAAAAAAGGAACAGTCCTCAAGGGGTTGCTTATAGGGTTCCTCCTGAGTTAGCTTATGGAAGCAAAGGAACATCTATTACCTTCTTGTTTACTGTTCATCAACTGTATGTATTTGCTGCTGATCTGTGGTTGGATGTGGAATTGCTATCCATCAAACAAAGTGCATTTGGTCCTTGCTGCAATTCTCAAAAAACCTGCCCAAGCTGTGGCTCCATTGAAGTTCCATATCCTTTGAGTACCAATCCCAACTGTGGTGACTTAGACTATACTCTCCACTGTGATTCTCATTCACAGAGACTCTACTTTCATTCACTCAATGGAAGTTCGTATCCCGTCCTCAAAATCAACGCGTCGAGTCGATGTATGGTGATCCAAACATCTCCATGGGTTCCTGGCTCCTGTGTTACTCAAGACATGTTGGTGAGTGAAGGCCTGTGGTTAAACCAATCACTCCCTTTTAACATCACTTCATCAAATACTATCTTCCTCTTCAACTGTTCGCCTCGCTTACTCGTCTCGCCACTCAATTGCACTTCTTCGAGTCTTTGTCACCAATACTTGGCAAGTTCAGGACATGTTGATGGAAAAAGAGCATTTCAATGTGCAAGTGTTCTTGATCCTTGTTGTACCTTCATCTCGGGCGGGACCCCCTCGGCGTATAAGATAAGGCTTCATAACTCAGGCTGTAGAGCATTCAGGAGCATCCTTCATCTAGATATAGGAAAGCCTGCAAATCAGTGGGAGGAAGGTTTGGAAATTCAATGGGCTGCTCCCCCTGAACCAGTCTGTAGAACTCAATCTGATTGCAGTGGAGAGTCGGATTGTCGTCCTACTGGTGGTTCGAACAGCCATTCTCGTTGCCTATGCAGAAGGAGATACTATTGGGATCATATTCTCGGAACATGTCGTAGAACAAATAGAAAGAGCATGGTTGGGCTCACTATAAAGCTCTCAGTATGTCTGGTTTCCTTTTTCATTTTAGCTGCAATTGTAGCTCTAATTACATTTAGGAAGTTCAGAACTTTCAGTAACAAAGAAAAGCTTTGTAAAGAAAGAGAAGATATGTTGAATTTCAACAATGGTGGCAGACCAGCCAGGATGTTTCATCTGAAAGAGATGAAGAAAGCAACCAATGAATTTTCAAAAGACAGGGTCCTCGGAAGCGGCGGCTTTGGAGAGGTTTACAAAGGCGAACTTCAAGACGGGACCGTCGTAGCCGTGAAATCGGCTAAAGTGGGCAATCTAAAGAGCACAGAGCAAATACTCAATGAAGTTGGAATACTATCTCAAGTAAATCACAAGAACCTTGTGAAACTTATAGGTTGTTGTGTAGAAACTGAGCAACCATTGATGATATATGAATACATTTCCAATGGTACCCTCCATGACCATTTACATGGCAAGTTTTCCACTTTCTTGGATTGGAGAAAAAGACTAAAAGTTGCTTCACAAACTGCTGAAGCATTAGCTTACTTGCATTCAGCTGCATACCCTCCCATCTATCATAGAGATGTCAAGTCAACAAACATACTCTTAGATGATAACTTCAATGCCAAAGTTGCAGATTTTGGACTTTCTAGATTGGCTTTGCCAGGAATAAGCCATGTTTCCACTTGTGCTCAAGGTACATTAGGTTACCTAGACCCGGAATACTATCGAAACTACCAACTAACAGATAAAAGCGACGTGTATAGTTTCGGAGTTGTCCTGCTCGAACTTTTAACCTCCCAGAAGGCCATAGATTTCACGAGAGATGAAGATGGTGTCAATCTAGCAATTTATGTGATCCAACAAGTGAACAATGGTGCATTCATCGACGCCATCGATAAATGCCTCCTCGGAGGCGATCAATCCAGCAATATACTGGTAAGTGTGAAGCACTTCTTGGAGCTCGCGCTCGCCTGTTTGAGGGAGAAGAAAGCGGAAAGGCCTTGCATGAAGGATGTACTCCAAGAACTCGATTACATAACTCAGATATTGGACAATCCAGAAACAGTTGTTGAAGAAGGTATATCTCAAGAAGCTTAG 3471 39.64 MDTTSRTGNLEPMLLKIGIPLALSAAGGVCAITMATGSFPASLNPFKPKSKPIKNDNFDSQNHSTPLSLEVDEVLSSLRTRVEDLERKEMEIEKQFVWYQNLKERETLLMELKNTLVLDMAHISFLEKEILLMEEESKRFESLVTEYLGVSEQLEGHKTENKLLEREVKRLKKRLKEQSKIIREKNLKIEESKTELWRNNGEMDTKKKMIEKLGNEVRELKMQMDQLQEEEEKRASSSFKIEEEKQVRMEDFNKLSNEFNQLKEEFEVLKNQEQKQQGQKENDEEAERKNKALDQNESSLCDQTKSTMPKLLQRISCVGRNLSRNRLKFHKQKIKNQMVIKRDLIGNLSENRFKFQKPKTKNQMISNGSNGLKFGHYYCQASLTSTPHGKLWPLRYYDLKIGEGLMESNSGPQKNYSLLQYALTSPIKFLLLYLLYQKKKKILFIDFIDILKVYYVAKWRGITFMTSKQGLGPYGFDVGQSEKRNSPQGVAYRVPPELAYGSKGTSITFLFTVHQLYVFAADLWLDVELLSIKQSAFGPCCNSQKTCPSCGSIEVPYPLSTNPNCGDLDYTLHCDSHSQRLYFHSLNGSSYPVLKINASSRCMVIQTSPWVPGSCVTQDMLVSEGLWLNQSLPFNITSSNTIFLFNCSPRLLVSPLNCTSSSLCHQYLASSGHVDGKRAFQCASVLDPCCTFISGGTPSAYKIRLHNSGCRAFRSILHLDIGKPANQWEEGLEIQWAAPPEPVCRTQSDCSGESDCRPTGGSNSHSRCLCRRRYYWDHILGTCRRTNRKSMVGLTIKLSVCLVSFFILAAIVALITFRKFRTFSNKEKLCKEREDMLNFNNGGRPARMFHLKEMKKATNEFSKDRVLGSGGFGEVYKGELQDGTVVAVKSAKVGNLKSTEQILNEVGILSQVNHKNLVKLIGCCVETEQPLMIYEYISNGTLHDHLHGKFSTFLDWRKRLKVASQTAEALAYLHSAAYPPIYHRDVKSTNILLDDNFNAKVADFGLSRLALPGISHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFTRDEDGVNLAIYVIQQVNNGAFIDAIDKCLLGGDQSSNILVSVKHFLELALACLREKKAERPCMKDVLQELDYITQILDNPETVVEEGISQEA 1156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43527057 43537457 + Sed0015840.1 Sed02g0586 704254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0586 1156 Pfam Wall-associated receptor kinase galacturonan-binding 547 604 IPR025287 GO:0030247(InterPro)
Sed02g0586 1156 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 519 1138 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Sed02g0586 1156 SMART serkin_6 861 1137 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed02g0586 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 981 993 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed02g0586 1156 ProSiteProfiles Protein kinase domain profile. 861 1137 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed02g0586 1156 FunFam Wall-associated receptor kinase-like 20 824 936 - -
Sed02g0586 1156 SUPERFAMILY Protein kinase-like (PK-like) 840 1134 IPR011009 -
Sed02g0586 1156 Coils Coil 203 237 - -
Sed02g0586 1156 ProSitePatterns Protein kinases ATP-binding region signature. 867 889 IPR017441 GO:0005524(InterPro)
Sed02g0586 1156 Gene3D Phosphorylase Kinase; domain 1 832 936 - -
Sed02g0586 1156 Gene3D Transferase(Phosphotransferase) domain 1 937 1150 - -
Sed02g0586 1156 Coils Coil 252 296 - -
Sed02g0586 1156 MobiDBLite consensus disorder prediction 271 295 - -
Sed02g0586 1156 MobiDBLite consensus disorder prediction 271 305 - -
Sed02g0586 1156 FunFam Wall-associated receptor kinase-like 20 937 1146 - -
Sed02g0586 1156 CDD STKc_IRAK 867 1135 - -
Sed02g0586 1156 Coils Coil 75 95 - -
Sed02g0586 1156 Pfam Protein tyrosine and serine/threonine kinase 863 1134 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed02g0586 1156 Coils Coil 154 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0586 Sed-Chr2:43527057 Sed10g0406 Sed-Chr10:2510059 3.20E-78 dispersed
Sed04g1429 Sed-Chr4:28842747 Sed02g0586 Sed-Chr2:43527057 1.40E-16 dispersed
Sed08g1236 Sed-Chr8:25491710 Sed02g0586 Sed-Chr2:43527057 8.20E-72 transposed
Sed10g2083 Sed-Chr10:37283960 Sed02g0586 Sed-Chr2:43527057 9.20E-82 transposed
Sed11g0393 Sed-Chr11:3773318 Sed02g0586 Sed-Chr2:43527057 2.20E-33 transposed
Sed11g2208 Sed-Chr11:35672717 Sed02g0586 Sed-Chr2:43527057 1.30E-166 transposed
Sed12g0658 Sed-Chr12:3913349 Sed02g0586 Sed-Chr2:43527057 1.10E-73 transposed
Sed12g1954 Sed-Chr12:30594098 Sed02g0586 Sed-Chr2:43527057 1.80E-72 transposed
Sed14g0522 Sed-Chr14:5123961 Sed02g0586 Sed-Chr2:43527057 4.70E-148 transposed
Sed02g0586 Sed-Chr2:43527057 Sed04g1428 Sed-Chr4:28842747 2.00E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78796 PF07714 PK_Tyr_Ser-Thr 2.00E-47 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0586 - - - 0.0