Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0587 ATGGGTTCCCATGGAAGAAGCAGCGATAGAAAGAGAGAGAAGTCATCTTCTTCAAGGAGACGTAGCAGAAGAAGGTCGGACGACTCCGAATCTGATTCCGAAAACTCAGACAGCCGCGATTCGTCTCCTTTGCCGAGCTCCCGGAAGCGCAGGGAAAGAGGCAGTGGTAGCCACCGGAGTAGTAGGCGAAGAAGCTCCTCGCGTCGGCGGGATTCGGGAGATAATAGTTCGAGTGATAGTTACGACAGCAATGATGGAGCGAGGAAAGTTACCGAAGAGGAAATTAGCGAATACTTGGCCAAGAAAGCGCAGAAAAAGGCCTTGCGAGTTGCTAAGAAATTGAAGTCGCAGACTGTTTCTGGTTATTCCAACGATTCGAATCCATTCGGCGATTCTAATCTGAATGAAAAATTTGTGTGGCGAAAGAAAATTGAGCGTGATGTTACTCATGGTGTGTCGCTTGATGCATTTTCAATGAAGTCCGAGAAAAAAAGACAGAGAGAAAGAATGGCAGAGATTGAAAAGGTGAAGAAAAGGAGAGAGGAAAGGGCTCTTGAAAAAGCACAACATGAGGAAGAAATGGCATTGCTAGCCAGAGAACGTGCTCGTGCTGAATTTCAGGATTGGGAGAAAAAGGAAGAAGAGTTCCATTTTGATCAAAGCAAAGTCAGATCAGAGATAAGAGTTCGTGATGGGCGTTCTAAGCCTATAGATGTTCTATCCAAGCAACTGAATGGATCAGATGATTTTGATATAGTAATAAATGAGCCATACACTGTATTCAAGGGCTTGACTGTGAAAGAAATGGAAGAGCTTCGCGATGACATCAAAATGCATCTTGATTTGGACAGGGCAACACCTACACATATCGAGTATTGGGAGGCACTTCTCGTGGTCTGTGATTGGGAACTAGCTGAAGCTCGAAAAAAGGATGCCCTGGATAGAGCCCGAGTTCGTGGCGAGGAGCCTCCTGCTGAGTTGCTTGCAGAAGAAAGGGGTCTGCATTCTAGCATTGAAACGGATGTCAAAAATCTTCTGGAAGGAAAGACTTATGGCGAATTGGAGGCATTACAATCTCAGATTGAGTCACAGATGCGATCTGGAACTGCAAAGGCTGTTGAGTACTGGGAGGCTGTCCTAAAGCGCATTCATATATACAAGGCCAAGGCTTGCTTAAAGGAAATTCATATGAAAAAACTGCATGAGCATCTTGTACGTCTCGAGCAGCCTTTCGACGAGGATGAAAACAATGAAGAAAAGACAGAACAGGACGTCAAGATGGAAACTGATCATTCTGTACAAGTGGAAGATGCTGCTGATGAGCTTGATGTTAAAGGAGCCGATACATATTCGCCTGATCTCCTCGATGAAGATGAGAATGAAGAGGCGGGATCATTTTCGCCAGAACTTATTTACGGTGATGAAGATGAAGAGGCAGTTGATCCTGAGGAGGATAGAGCCATACTGGAACGCAAACGTATTGCTGTCTTAGAAGAACAGCAGAGACGTATACAAGAAGCAATGGCCACGAAACCTGCTCCTCCACCAGACGACAATTTTGAGCTGAAAGCTTCAAAAGCCATGGGAGTTATGGAGGAAGGCGATGCAGTTTTTGGATCTGGTGCTGAAGTGAACCTGGATTCTCAGGTTTACTGGTGGCATGATAAATATCGTCCAAGAAAACCGAAATACTTCAATCGGGTTCACACAGGATATGAGTGGAACAAGTACAACCAGACTCACTATGATCATGACAATCCACCTCCAAAGATTGTGCAAGGATATAAATTTAACATATTCTATCCAGACCTTGTTGACAAGATAAAAGCTCCAACTTACACCATTGAAAAGGATGGAAACAGCAGTGAGACTTGTATCATAAGGTTTCATGCAGGGCCACCATATGAGGATATTGCATTCCGAATTGTAAACAAAGAATGGGAGTACTCCCATAAGAAGGGGTTTAAGTGCACATTTGAGCGTGGAATTTTGCACGTGTACTTCAACTTTAAACGATATCGTTATCGCAGGTAA 2034 44.25 MGSHGRSSDRKREKSSSSRRRSRRRSDDSESDSENSDSRDSSPLPSSRKRRERGSGSHRSSRRRSSSRRRDSGDNSSSDSYDSNDGARKVTEEEISEYLAKKAQKKALRVAKKLKSQTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTHGVSLDAFSMKSEKKRQRERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRVRDGRSKPIDVLSKQLNGSDDFDIVINEPYTVFKGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKAVEYWEAVLKRIHIYKAKACLKEIHMKKLHEHLVRLEQPFDEDENNEEKTEQDVKMETDHSVQVEDAADELDVKGADTYSPDLLDEDENEEAGSFSPELIYGDEDEEAVDPEEDRAILERKRIAVLEEQQRRIQEAMATKPAPPPDDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43541060 43551570 - Sed0027110.1 Sed02g0587 704255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0587 677 SMART CactinC_cactus_3 553 677 - -
Sed02g0587 677 MobiDBLite consensus disorder prediction 1 90 - -
Sed02g0587 677 Pfam Cactus-binding C-terminus of cactin protein 553 677 IPR019134 GO:0005515(InterPro)
Sed02g0587 677 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 52 677 - GO:0005681(PANTHER)|GO:0005737(PANTHER)|GO:0045292(PANTHER)
Sed02g0587 677 MobiDBLite consensus disorder prediction 116 133 - -
Sed02g0587 677 MobiDBLite consensus disorder prediction 420 452 - -
Sed02g0587 677 MobiDBLite consensus disorder prediction 409 486 - -
Sed02g0587 677 Coils Coil 163 207 - -
Sed02g0587 677 MobiDBLite consensus disorder prediction 52 66 - -
Sed02g0587 677 Pfam Conserved mid region of cactin 199 396 IPR018816 -
Sed02g0587 677 MobiDBLite consensus disorder prediction 1 51 - -
Sed02g0587 677 MobiDBLite consensus disorder prediction 104 133 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0587 K25058 - csv:101205416 1086.25