Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0718 ATGGCTAATCTAAATGTGGTGCCGGAAGTTCGTCCGCCGTCAATGGAGGCCGGCGCGGAACAGCCTCCGCTCTTCGACGGAACCACCAGGTTGTACATGGCTTACTATTGCCCCTTTGCACAGCGTGCTTGGATCACAAGAAATTGCAAGGGATTGCAAGATGAAATTAAACTGGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTCTACCCTTCAAACAAGGTGCCAGCTTTGGAACATAATGGGAAAGTTATTGGAGAAAGCCTTGATTTAATCAAATATATAGACAGCAACTTTGAAGGACCTTCACTTTTCCCAGATGATTCTGCTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTATTGGGGTAGTATACCCTTCATTTAAGGGTGACCCAGCCAAGGAAGCAGGTCCTCAATTTGATTACCTGGAAAATGCTCTGAAGAAATTTGATGATGGGCCATTCTTTCTGGGACAATTTAGTGGGGTGGACATTGCATACATCACATTCATTGAAAGGTTCCACGTTTTCTTAGCTGAGGTTTTCAAGTTTGATATCACAAAAGGAAGGCCTAATCTTGCGGCATGGATTGAGGAGTTGAACAAGATTGATGCTTACAAGCAAACAAAATATGATCGTGAGGCCATTGTTGAACTTTACAAGAACCGATTCATGGCTTAG 711 42.9 MANLNVVPEVRPPSMEAGAEQPPLFDGTTRLYMAYYCPFAQRAWITRNCKGLQDEIKLVPLNLQNRPAWYKEKVYPSNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDSAKRQFGEELLAYTDTFIGVVYPSFKGDPAKEAGPQFDYLENALKKFDDGPFFLGQFSGVDIAYITFIERFHVFLAEVFKFDITKGRPNLAAWIEELNKIDAYKQTKYDREAIVELYKNRFMA 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45010403 45017283 + Sed0012664.1 Sed02g0718 704386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0718 236 CDD GST_C_Lambda 113 231 - -
Sed02g0718 236 FunFam Glutathione S-transferase L2, chloroplastic 2 105 - -
Sed02g0718 236 SFLD Main (cytGST) 30 211 - -
Sed02g0718 236 Gene3D - 106 236 - -
Sed02g0718 236 Pfam Glutathione S-transferase, C-terminal domain 150 208 - -
Sed02g0718 236 SUPERFAMILY Thioredoxin-like 21 109 IPR036249 -
Sed02g0718 236 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 235 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Sed02g0718 236 SUPERFAMILY GST C-terminal domain-like 104 234 IPR036282 -
Sed02g0718 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
Sed02g0718 236 FunFam Lambda class glutathione S-transferase 106 236 - -
Sed02g0718 236 SFLD Glutathione Transferase (cytosolic) 30 211 IPR040079 -
Sed02g0718 236 Gene3D Glutaredoxin 3 105 - -
Sed02g0718 236 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0718 Sed-Chr2:45010403 Sed02g0722 Sed-Chr2:45032798 3.00E-100 dispersed
Sed02g0718 Sed-Chr2:45010403 Sed02g0719 Sed-Chr2:45010403 2.70E-101 tandem
Sed02g0718 Sed-Chr2:45010403 Sed04g1311 Sed-Chr4:27396333 1.70E-98 wgd
Sed02g0718 Sed-Chr2:45010403 Sed04g2736 Sed-Chr4:39574289 6.10E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0718 K00799 - csv:101210004 430.639