Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0719 ATGGCTAATCTAAATGTGGTGCCGGAAGTTCGTCCGCCGTCAATGGAGGCCGGCGCGGAACAGCCTCCGCTCTTCGACGGAACCACCAGGTTGTACATGGCTTACTATTGCCCCTTTGCACAGCGTGCTTGGATCACAAGAAATTGCAAGGGATTGCAAGATGAAATTAAACTGGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTCTACCCTTCAAACAAGGTGCCAGCTTTGGAACATAATGGGAAAGTTATTGGAGAAAGCCTTGATTTAATCAAATATATAGACAGCAACTTTGAAGGACCTTCACTTTTCCCAGATGATTCTGCTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTATTGGGGTAGTATACCCTTCATTTAAGGGTGACCCAGCCAAGGAAGCAGGTCCTCAATTTGATTACCTGGAAAATGCTCTGAAGAAATTTGATGATGGGCCATTCTTTCTGGGACAATTTAGTGGGGTACTTTTACTTTATTTATATTTGCAAGTGTCTCGACCAATTTATTCGTGCTTCGACTATAACATTTGCGTGACTGTACTATTTAGATTCATGATGACAAACCTAAAGGTGTCTCATCAATTACTTAATGATGAAATGTGGTCACACTTTTTATAA 672 41.22 MANLNVVPEVRPPSMEAGAEQPPLFDGTTRLYMAYYCPFAQRAWITRNCKGLQDEIKLVPLNLQNRPAWYKEKVYPSNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDSAKRQFGEELLAYTDTFIGVVYPSFKGDPAKEAGPQFDYLENALKKFDDGPFFLGQFSGVLLLYLYLQVSRPIYSCFDYNICVTVLFRFMMTNLKVSHQLLNDEMWSHFL 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45010403 45017283 + Sed0012664.2 Sed02g0719 704387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0719 223 Pfam Glutathione S-transferase, N-terminal domain 31 107 IPR004045 -
Sed02g0719 223 SUPERFAMILY Thioredoxin-like 21 109 IPR036249 -
Sed02g0719 223 SUPERFAMILY GST C-terminal domain-like 104 169 IPR036282 -
Sed02g0719 223 Gene3D Glutaredoxin 3 105 - -
Sed02g0719 223 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 178 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Sed02g0719 223 FunFam Glutathione S-transferase L2, chloroplastic 2 105 - -
Sed02g0719 223 Gene3D - 106 191 - -
Sed02g0719 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 27 108 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0719 Sed-Chr2:45010403 Sed04g1311 Sed-Chr4:27396333 2.30E-73 dispersed
Sed02g0718 Sed-Chr2:45010403 Sed02g0719 Sed-Chr2:45010403 2.70E-101 tandem
Sed02g0719 Sed-Chr2:45010403 Sed02g0720 Sed-Chr2:45021248 6.40E-60 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0719 K00799 - csv:101210004 329.717