Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed02g0719 | ATGGCTAATCTAAATGTGGTGCCGGAAGTTCGTCCGCCGTCAATGGAGGCCGGCGCGGAACAGCCTCCGCTCTTCGACGGAACCACCAGGTTGTACATGGCTTACTATTGCCCCTTTGCACAGCGTGCTTGGATCACAAGAAATTGCAAGGGATTGCAAGATGAAATTAAACTGGTGCCTCTAAACCTTCAAAACAGGCCTGCCTGGTATAAGGAAAAAGTCTACCCTTCAAACAAGGTGCCAGCTTTGGAACATAATGGGAAAGTTATTGGAGAAAGCCTTGATTTAATCAAATATATAGACAGCAACTTTGAAGGACCTTCACTTTTCCCAGATGATTCTGCTAAAAGACAATTTGGTGAAGAGTTGCTAGCTTATACTGATACATTTATTGGGGTAGTATACCCTTCATTTAAGGGTGACCCAGCCAAGGAAGCAGGTCCTCAATTTGATTACCTGGAAAATGCTCTGAAGAAATTTGATGATGGGCCATTCTTTCTGGGACAATTTAGTGGGGTACTTTTACTTTATTTATATTTGCAAGTGTCTCGACCAATTTATTCGTGCTTCGACTATAACATTTGCGTGACTGTACTATTTAGATTCATGATGACAAACCTAAAGGTGTCTCATCAATTACTTAATGATGAAATGTGGTCACACTTTTTATAA | 672 | 41.22 | MANLNVVPEVRPPSMEAGAEQPPLFDGTTRLYMAYYCPFAQRAWITRNCKGLQDEIKLVPLNLQNRPAWYKEKVYPSNKVPALEHNGKVIGESLDLIKYIDSNFEGPSLFPDDSAKRQFGEELLAYTDTFIGVVYPSFKGDPAKEAGPQFDYLENALKKFDDGPFFLGQFSGVLLLYLYLQVSRPIYSCFDYNICVTVLFRFMMTNLKVSHQLLNDEMWSHFL | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 45010403 | 45017283 | + | Sed0012664.2 | Sed02g0719 | 704387 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed02g0719 | 223 | Pfam | Glutathione S-transferase, N-terminal domain | 31 | 107 | IPR004045 | - | |
Sed02g0719 | 223 | SUPERFAMILY | Thioredoxin-like | 21 | 109 | IPR036249 | - | |
Sed02g0719 | 223 | SUPERFAMILY | GST C-terminal domain-like | 104 | 169 | IPR036282 | - | |
Sed02g0719 | 223 | Gene3D | Glutaredoxin | 3 | 105 | - | - | |
Sed02g0719 | 223 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 6 | 178 | IPR044629 | GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER) | |
Sed02g0719 | 223 | FunFam | Glutathione S-transferase L2, chloroplastic | 2 | 105 | - | - | |
Sed02g0719 | 223 | Gene3D | - | 106 | 191 | - | - | |
Sed02g0719 | 223 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 27 | 108 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g0719 | Sed-Chr2:45010403 | Sed04g1311 | Sed-Chr4:27396333 | 2.30E-73 | dispersed | |
Sed02g0718 | Sed-Chr2:45010403 | Sed02g0719 | Sed-Chr2:45010403 | 2.70E-101 | tandem | |
Sed02g0719 | Sed-Chr2:45010403 | Sed02g0720 | Sed-Chr2:45021248 | 6.40E-60 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed02g0719 | K00799 | - | csv:101210004 | 329.717 |