Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0722 ATGGCTACCCTGCTACCTCCTTCATTGGACGCCTCCGCCGAACAGCCCCCTCTCTTCGACGGAACTACCAGGCTGTATACTGCTTATATATGCCCGTTTGCTCAACGTGTGTGGATCGCCCGGAATTACAAGGGGCTACAAGATAAAATTAAGCTGGTTCCTCTCAACCTTAATAATAGGCCTGACTGGTATAAGGAAAAAGTATACCCTGTAAACAAGGTTCCAGCTCTAGAACATGATGGGAAAGTTATTGGAGAAAGTCTTGATCTGGTCAAATATGTTGATAGCAACTTTGAAGGACCTTCACTACTCCCAGATGATCCTGCTAAAAGAGAGTATGCTGAAGAGTTGCTATCCTACAGCGATACGTGTATTGGCGCAATAATCGCTTCGTTTAAAGGTGACACCGCAAAGGAAGCAGGTATTCAGCTCGATTATTTGGAAAATGCTTTGCATAAGTTCGATGGCCCATTCTTCCTTGGAGAAATCAGTCAGGTGGATATAGCATATATTCCATTTATTGAAAGGTACCAAATTTTCTTATCGGAGCTTTTCAAGATTGATATCACTGAAGGAAGGCCTAAACTAGCTGCTTGGATTGAGGAGCTCAACAAGATTGATGCTTACAAGGAAACCAAATATGATCCTAAGGTCATTGTTGAACATTACAAGAAGCGCTACATGGGTTGA 690 42.75 MATLLPPSLDASAEQPPLFDGTTRLYTAYICPFAQRVWIARNYKGLQDKIKLVPLNLNNRPDWYKEKVYPVNKVPALEHDGKVIGESLDLVKYVDSNFEGPSLLPDDPAKREYAEELLSYSDTCIGAIIASFKGDTAKEAGIQLDYLENALHKFDGPFFLGEISQVDIAYIPFIERYQIFLSELFKIDITEGRPKLAAWIEELNKIDAYKETKYDPKVIVEHYKKRYMG 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45032798 45037444 + Sed0010911.1 Sed02g0722 704390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0722 229 FunFam Lambda class glutathione S-transferase 100 229 - -
Sed02g0722 229 SFLD Glutathione Transferase (cytosolic) 24 204 IPR040079 -
Sed02g0722 229 FunFam Glutathione S-transferase L2, chloroplastic 1 99 - -
Sed02g0722 229 SFLD Main (cytGST) 24 204 - -
Sed02g0722 229 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 228 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Sed02g0722 229 Gene3D - 100 229 - -
Sed02g0722 229 Gene3D Glutaredoxin 1 99 - -
Sed02g0722 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 21 102 IPR004045 -
Sed02g0722 229 SUPERFAMILY GST C-terminal domain-like 98 226 IPR036282 -
Sed02g0722 229 Pfam Glutathione S-transferase, C-terminal domain 144 201 - -
Sed02g0722 229 Pfam Glutathione S-transferase, N-terminal domain 25 101 IPR004045 -
Sed02g0722 229 SUPERFAMILY Thioredoxin-like 15 103 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0718 Sed-Chr2:45010403 Sed02g0722 Sed-Chr2:45032798 3.00E-100 dispersed
Sed02g0722 Sed-Chr2:45032798 Sed03g3068 Sed-Chr3:47423015 2.90E-108 dispersed
Sed02g0721 Sed-Chr2:45021248 Sed02g0722 Sed-Chr2:45032798 1.20E-109 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0722 K00799 - csv:101211241 395.971