Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0755 ATGTTGATTTTCTTTCCATTTTCTTCGTCATTTACCTTTGCATTACTTTTGATTTTCTTCTTAACGGCTGCAATTTTCAAATTCGCCGCCGCCGCCGCCGTGACGGAGTTCGACTTCGGCACCGTCGAACTCAGTAGCTTGAAACTTCTCGGCGATGCCCACTTGAACAACGGGAGCGTGAGGCTCACGCGCGACCTCGCCGTTCCCAACTCCGGCGCCGGCAGAGTCCTCTACGCCAAACCCATCAGGTTCCGGCAGCCGGGAAGTAACACACTCGCCAGTTTCTCTACGTTTTTCTCATTTTCCATCACGAATCTCAACCCTTCCTCGATCGGCGGCGGTTTGGCGTTTGTAATCTCGCCGGACGCCGATAGTGTCGGCGGTGCCGGTGGGTTTTTGGGTTTGACCGATAACAGGGGATTCGGATTCGTGGCGGTTGAGTTCGACACGTTGATGGATGTTGAATTTAAGGACATTAATGGGAATCATGTCGGATTGGATCTGAACGACATGGTTTCGTTGCGGGTTAAAGATCTGGACGGGATTGGAATCGATCTCAAAAGCGGCGATACGGTCAATTCTTGGATCGAATACGACGGGTCTGCTCGGATCTTCAAAATCTTCGTTTCTTATTCGAATTTGAAACCGACGGAACCTTTGTTGTCGTTCGATCTCGATCTTGATTCGTATTTGAACGATTTTATGTACGTCGGATTTTCCGGTTCGACTCAGGGGAGTACGGAAGTTCACAGTATCGACTGGTGGAGCTTTACATCGTCGTTCGAGTCTACCGGAGAAAATCCGCCGCCGCCGACGACGACGCTGATGAACCCATCGGCGAATATCGTCCGGCCTCCGCCGCCGTCGCAACCGCCGTCGGGGTCAGATTCCGTTACTCAAAAGGAGACCAAGTCGTCGTCGTCCTGCCACAACGGTCTCTGTAAGCAAGGCGCCGGCGCGGTGGTCGGAGTAGTGACGGCGGGGGCGTTTGTGCTAGCATTATTCGCCGGCGGGTTAATTTGGGTATATTCGAAAAAAATCAAAAGGGTAAAGAAATCAGACTCACTCGCAACGGAATACATCAAAATGCCCAAAGAATTCACTTACAAAGAGCTCAAAATCGCCACCAAATGCTTCAATTCGAACCGAATCATCGGCAATGGCGCTTTTGGGACGGTTTATAAAGGGATTTTACCGGAGACCGGCGACATTGTGGCGGTGAAACGGTGTAGCCATAGCACACAAGGGAAAAACGAATTTCTGTCTGAACTTTCGATCATCGGAACTCTCCGGCACCGGAATTTGGTTCGTCTTCAAGGTTGGTGCCACGAGAAGGACGAGATTTTACTCGTTTACGATTTAATGCCAAATGGGAGTTTGGATAAAGCCCTTTTCGAGGCCAGATCGCCGCTGCCGTGGCCTCACCGGAGAAAAATCCTCCTCGGCGTCGCGTCGGCGTTGGCCTATTTGCATCAGGAATGCGAAAATCAAGTCATTCACAGAGACGTCAAAACCAGTAACATAATGTTGGATGAAGGATTCAATGCCCGATTAGGCGATTTCGGGTTGGCCCGACAAGTGGAGCACGATAAATCCCCGGACGCCACCGTCGCCGCCGGTACAATGGGGTATTTAGCGCCGGAATATCTCCTCACCGGAAGAGCAACGGAAAAAACCGACGTGTTCAGCTACGGCGCCGTCGTTCTTGAAGTCGCCAGCGGTAGGAGACCTATAGAGAAAGAAACGGCCGGCGCCGCCAACGGCGGAAAATTCGGCGGCAGCAGTAATTTGGTGGATTGGGTTTGGAATCTCCACCGTGAAGGGCGGTTGTTGACGGCGGCCGACGGGAGACTCGGCGGCGAGTTCGAAGATTCGGAAATGCGGAAAATTTTATTAGTCGGGTTGGCTTGTTCGCACCCGGATCCGATGACCCGACCCACGATGAGAGGCGTAGAGCAAATGTTAACCGGCGATTCGGAGATTCCGATCGTGCCTCGGTCCAAGCCGTCGACGAGTTTCAGTACCGCTCATTTGCTACTCACTCTACAAGACAGCGTGTCCGATCTGAACGACATGATCGCCATTTCCATTTCCTCGTCCGAGGACAGTTTCAAGGGTGGGGATTTGATCTCGCTTGATGATCGGACGGCGGGCAATCGATGA 2163 52.2 MLIFFPFSSSFTFALLLIFFLTAAIFKFAAAAAVTEFDFGTVELSSLKLLGDAHLNNGSVRLTRDLAVPNSGAGRVLYAKPIRFRQPGSNTLASFSTFFSFSITNLNPSSIGGGLAFVISPDADSVGGAGGFLGLTDNRGFGFVAVEFDTLMDVEFKDINGNHVGLDLNDMVSLRVKDLDGIGIDLKSGDTVNSWIEYDGSARIFKIFVSYSNLKPTEPLLSFDLDLDSYLNDFMYVGFSGSTQGSTEVHSIDWWSFTSSFESTGENPPPPTTTLMNPSANIVRPPPPSQPPSGSDSVTQKETKSSSSCHNGLCKQGAGAVVGVVTAGAFVLALFAGGLIWVYSKKIKRVKKSDSLATEYIKMPKEFTYKELKIATKCFNSNRIIGNGAFGTVYKGILPETGDIVAVKRCSHSTQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKDEILLVYDLMPNGSLDKALFEARSPLPWPHRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKETAGAANGGKFGGSSNLVDWVWNLHREGRLLTAADGRLGGEFEDSEMRKILLVGLACSHPDPMTRPTMRGVEQMLTGDSEIPIVPRSKPSTSFSTAHLLLTLQDSVSDLNDMIAISISSSEDSFKGGDLISLDDRTAGNR 720
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45263499 45266224 - Sed0005657.1 Sed02g0755 704423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0755 720 Gene3D - 33 271 - -
Sed02g0755 720 FunFam L-type lectin-domain containing receptor kinase VIII.1 343 454 - -
Sed02g0755 720 CDD lectin_legume_LecRK_Arcelin_ConA 35 261 IPR001220 GO:0030246(InterPro)
Sed02g0755 720 PANTHER - 39 670 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)
Sed02g0755 720 Gene3D Phosphorylase Kinase; domain 1 341 454 - -
Sed02g0755 720 Gene3D Transferase(Phosphotransferase) domain 1 455 662 - -
Sed02g0755 720 Pfam Legume lectin domain 37 264 IPR001220 GO:0030246(InterPro)
Sed02g0755 720 Pfam Protein kinase domain 380 648 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed02g0755 720 FunFam L-type lectin-domain containing receptor kinase VIII.1 455 673 - -
Sed02g0755 720 SUPERFAMILY Protein kinase-like (PK-like) 360 686 IPR011009 -
Sed02g0755 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Sed02g0755 720 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Sed02g0755 720 FunFam L-type lectin-domain containing receptor kinase VIII.1 33 269 - -
Sed02g0755 720 ProSiteProfiles Protein kinase domain profile. 379 655 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed02g0755 720 CDD STKc_IRAK 385 657 - -
Sed02g0755 720 SMART serkin_6 379 655 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Sed02g0755 720 MobiDBLite consensus disorder prediction 271 293 - -
Sed02g0755 720 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 268 IPR013320 -
Sed02g0755 720 ProSitePatterns Protein kinases ATP-binding region signature. 385 408 IPR017441 GO:0005524(InterPro)
Sed02g0755 720 MobiDBLite consensus disorder prediction 263 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0755 Sed-Chr2:45263499 Sed03g1346 Sed-Chr3:8593281 1.80E-175 dispersed
Sed02g0755 Sed-Chr2:45263499 Sed04g1242 Sed-Chr4:26107696 5.80E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78801 PF00069 Pkinase 3.30E-51 CL0016 Sed PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0755 - - - 0.0