Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sed02g0797 | ATGGTTCTCTCTCTCATCATTTTCTCTCTCCTCTTCCTCGTCGTCGCCTACAACCTCCTCCACCGCCTCCGGTTCAAGCTCCCCCCCGGTCCGCGTCCGCTCCCGGTGGTGGGAAACCTGTACGACGTGAAGCCGGTCCGGTTCCGATGCTACGCGGAGTGGGCGGAGAAGTTCGGGCCGGTGATATCGGTGTGGCTCGGGTCGACCCTGAACGTGGTGGTGTCGAGCACGGAGTTGGCGAGGGAGGTGCTGAAGGAGCACGACCAGAGCCTGGCGGACCGGCACCGGACCCGGTCGGCGGCGAAATTCAGCCGCGACGGGCAGGACCTGATTTGGGCCGATTACGGACCGCACTACGTGAAGGTGAGGAAAGTCTGCACCATCGAGCTGTTCTCCCCCAAGCGCCTTGAATCCCTCAGACCCATTCGAGAAGACGAAGTTTCCGCCATGGTTGAACATATTTTCAACCTCTGCTGCTCTCACCATGCTGATGGCTCAGGAAAGAGTTTGCAAGTGAGGGAGTTTCTGGGAGCCGTTTCATTCAACAACATCACAAGGCTCGCATTCGGGAAGAGATTCGTGAGCTCCAATGGCGTCATGGACGAGCAAGGGCTCGAATTCAAGGCCATTGTCGCCAACGGTCTCAAGCTCGGCGCCTCCCTGGCCATGGCGGAGCACATCCCCTGGCTCCGCTGGATGTTCCCTCTCGAGGAAGAAGCCTTCGCCAAGCACGGCGCCCGCCGCGACCGCCTCACCCGAGCCATCATGGACGAGCACACCAATGCCCGCAACCGCAGCGGCCATGTCAAGAACCACTTCGTTGATGCGCTCCTCACTCTCAAGGATAAGTACGATCTCAGCGAAGACACCATCATCGGCCTGCTTTGGGATATGATCACGGCGGGCATGGACACGACTGCAATTTCAGTGGAATGGGCGATGGCGGAGATTGTAAGAAATCCAAGAGTGCAAAAGAAGGTTCAAGAAGAACTAGACAATGTGATCGGAGTAGATCGGATCATGACAGAGAACGATTTCTCAAAACTCCCATACCTCCAATGCGTGGTCAAGGAAGCACTGAGATTACATCCGCCGACGCCGTTGATGCTGCCGCACCGAGCCAACGCAAACGTCAAGCTCGGCGGCTACGACGTCCCGAAGGGCTCGAACGTGCACGTGAACGTGTGGGCGGTGGCGCGTGATCCAGCAGTGTGGAAGAACCCTGATGAATTCTGGCCGGAGAGGTTCTTGGAAGAGGATGTGGACATGAAAGGGCACGATCTCCGGCTGCTGCCATTCGGGGCCGGGCGGCGGGTCTGCCCAGGAGCTCAACTGGGGATCAACTTGGTGACCTCCATGTTCGGGCACCTTCTGCACCATTATGAATGGACGCCGTCGCCGGGGACGAAGGCGGAGGAGATCGACATGTCGGAGAGCCCTGGATTGGTGTCGTACATGAAGACACCGTTGCAGGCTGTGGCTACTCCCAGGCTGCCTTCGCATTTGTACAAACGTGTGCCTGTGGACATGTAA | 1533 | 58.38 | MVLSLIIFSLLFLVVAYNLLHRLRFKLPPGPRPLPVVGNLYDVKPVRFRCYAEWAEKFGPVISVWLGSTLNVVVSSTELAREVLKEHDQSLADRHRTRSAAKFSRDGQDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEHIFNLCCSHHADGSGKSLQVREFLGAVSFNNITRLAFGKRFVSSNGVMDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMDEHTNARNRSGHVKNHFVDALLTLKDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRNPRVQKKVQEELDNVIGVDRIMTENDFSKLPYLQCVVKEALRLHPPTPLMLPHRANANVKLGGYDVPKGSNVHVNVWAVARDPAVWKNPDEFWPERFLEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMFGHLLHHYEWTPSPGTKAEEIDMSESPGLVSYMKTPLQAVATPRLPSHLYKRVPVDM | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 45657983 | 45661885 | + | Sed0003832.1 | Sed02g0797 | 704465 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 55 | 74 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 79 | 100 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PANTHER | CYTOCHROME P450 98A9 | 5 | 505 | - | - | |
| Sed02g0797 | 510 | SUPERFAMILY | Cytochrome P450 | 28 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Sed02g0797 | 510 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | Gene3D | Cytochrome P450 | 21 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Sed02g0797 | 510 | FunFam | Cytochrome P450 | 21 | 501 | - | - | |
| Sed02g0797 | 510 | CDD | CYP98 | 58 | 492 | - | - | |
| Sed02g0797 | 510 | Pfam | Cytochrome P450 | 28 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Sed01g2626 | Sed-Chr1:20322618 | Sed02g0797 | Sed-Chr2:45657983 | 2.50E-54 | dispersed | |
| Sed02g0797 | Sed-Chr2:45657983 | Sed06g2268 | Sed-Chr6:46237609 | 1.40E-97 | dispersed | |
| Sed12g1818 | Sed-Chr12:29404566 | Sed02g0797 | Sed-Chr2:45657983 | 1.10E-51 | dispersed | |
| Sed13g1703 | Sed-Chr13:22083083 | Sed02g0797 | Sed-Chr2:45657983 | 1.30E-50 | dispersed | |
| Sed02g0797 | Sed-Chr2:45657983 | Sed06g2267 | Sed-Chr6:46230922 | 1.10E-99 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sed02g0797 | K09754 | - | csv:101217257 | 878.241 |