Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0797 ATGGTTCTCTCTCTCATCATTTTCTCTCTCCTCTTCCTCGTCGTCGCCTACAACCTCCTCCACCGCCTCCGGTTCAAGCTCCCCCCCGGTCCGCGTCCGCTCCCGGTGGTGGGAAACCTGTACGACGTGAAGCCGGTCCGGTTCCGATGCTACGCGGAGTGGGCGGAGAAGTTCGGGCCGGTGATATCGGTGTGGCTCGGGTCGACCCTGAACGTGGTGGTGTCGAGCACGGAGTTGGCGAGGGAGGTGCTGAAGGAGCACGACCAGAGCCTGGCGGACCGGCACCGGACCCGGTCGGCGGCGAAATTCAGCCGCGACGGGCAGGACCTGATTTGGGCCGATTACGGACCGCACTACGTGAAGGTGAGGAAAGTCTGCACCATCGAGCTGTTCTCCCCCAAGCGCCTTGAATCCCTCAGACCCATTCGAGAAGACGAAGTTTCCGCCATGGTTGAACATATTTTCAACCTCTGCTGCTCTCACCATGCTGATGGCTCAGGAAAGAGTTTGCAAGTGAGGGAGTTTCTGGGAGCCGTTTCATTCAACAACATCACAAGGCTCGCATTCGGGAAGAGATTCGTGAGCTCCAATGGCGTCATGGACGAGCAAGGGCTCGAATTCAAGGCCATTGTCGCCAACGGTCTCAAGCTCGGCGCCTCCCTGGCCATGGCGGAGCACATCCCCTGGCTCCGCTGGATGTTCCCTCTCGAGGAAGAAGCCTTCGCCAAGCACGGCGCCCGCCGCGACCGCCTCACCCGAGCCATCATGGACGAGCACACCAATGCCCGCAACCGCAGCGGCCATGTCAAGAACCACTTCGTTGATGCGCTCCTCACTCTCAAGGATAAGTACGATCTCAGCGAAGACACCATCATCGGCCTGCTTTGGGATATGATCACGGCGGGCATGGACACGACTGCAATTTCAGTGGAATGGGCGATGGCGGAGATTGTAAGAAATCCAAGAGTGCAAAAGAAGGTTCAAGAAGAACTAGACAATGTGATCGGAGTAGATCGGATCATGACAGAGAACGATTTCTCAAAACTCCCATACCTCCAATGCGTGGTCAAGGAAGCACTGAGATTACATCCGCCGACGCCGTTGATGCTGCCGCACCGAGCCAACGCAAACGTCAAGCTCGGCGGCTACGACGTCCCGAAGGGCTCGAACGTGCACGTGAACGTGTGGGCGGTGGCGCGTGATCCAGCAGTGTGGAAGAACCCTGATGAATTCTGGCCGGAGAGGTTCTTGGAAGAGGATGTGGACATGAAAGGGCACGATCTCCGGCTGCTGCCATTCGGGGCCGGGCGGCGGGTCTGCCCAGGAGCTCAACTGGGGATCAACTTGGTGACCTCCATGTTCGGGCACCTTCTGCACCATTATGAATGGACGCCGTCGCCGGGGACGAAGGCGGAGGAGATCGACATGTCGGAGAGCCCTGGATTGGTGTCGTACATGAAGACACCGTTGCAGGCTGTGGCTACTCCCAGGCTGCCTTCGCATTTGTACAAACGTGTGCCTGTGGACATGTAA 1533 58.38 MVLSLIIFSLLFLVVAYNLLHRLRFKLPPGPRPLPVVGNLYDVKPVRFRCYAEWAEKFGPVISVWLGSTLNVVVSSTELAREVLKEHDQSLADRHRTRSAAKFSRDGQDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEHIFNLCCSHHADGSGKSLQVREFLGAVSFNNITRLAFGKRFVSSNGVMDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMDEHTNARNRSGHVKNHFVDALLTLKDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRNPRVQKKVQEELDNVIGVDRIMTENDFSKLPYLQCVVKEALRLHPPTPLMLPHRANANVKLGGYDVPKGSNVHVNVWAVARDPAVWKNPDEFWPERFLEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMFGHLLHHYEWTPSPGTKAEEIDMSESPGLVSYMKTPLQAVATPRLPSHLYKRVPVDM 510
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 45657983 45661885 + Sed0003832.1 Sed02g0797 704465
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0797 510 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PANTHER CYTOCHROME P450 98A9 5 505 - -
Sed02g0797 510 SUPERFAMILY Cytochrome P450 28 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Sed02g0797 510 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 Gene3D Cytochrome P450 21 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g0797 510 FunFam Cytochrome P450 21 501 - -
Sed02g0797 510 CDD CYP98 58 492 - -
Sed02g0797 510 Pfam Cytochrome P450 28 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed01g2626 Sed-Chr1:20322618 Sed02g0797 Sed-Chr2:45657983 2.50E-54 dispersed
Sed02g0797 Sed-Chr2:45657983 Sed06g2268 Sed-Chr6:46237609 1.40E-97 dispersed
Sed12g1818 Sed-Chr12:29404566 Sed02g0797 Sed-Chr2:45657983 1.10E-51 dispersed
Sed13g1703 Sed-Chr13:22083083 Sed02g0797 Sed-Chr2:45657983 1.30E-50 dispersed
Sed02g0797 Sed-Chr2:45657983 Sed06g2267 Sed-Chr6:46230922 1.10E-99 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0797 K09754 - csv:101217257 878.241