Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed02g0891 | ATGGAGATGGTGGCCGAGAAGAAGGATTTTGATTCTGCAATCGACAACAACAAGCTCAACTCTGCTCAATCAGTTCATGATTCTTCGTATCCACCCTCGATCGCTGCCGATGAAACTGGCAGCAATAACAATTTCAAAGAAGCTGAAGATTTAAGTGAACGCGTTGCTCGAGATATCAAAGATGGCCTCCATCCCCTAAGGCACAAGTTTTCATTTTGGTTCACTCGCCGAACACCTGGAGTTCGGACTCAAACATCATATGAGGATAACATAAAAAAGATCGTGGACTTTAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCCCGTCCTGCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTCAAGGAAGGAATACGCCCACTTTGGGAGGATTCTGCCAACTGCCACGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGTCGATTTTGGGAAGATTTAGTTCTTGCATTAGTGGGAGACCAGCTTGATTTCGGCGATAGCATATGTGGTGCTGTGCTTAGCATTCGTTTCAATGAGGATATTTTGAGTGTCTGGAATCACAATGCAAATGATCATCAGGCGGTGATGGGTCTGCGGGATTCGATCAAACGACACTTAAAGCTACCACATGGGTACGTAATGGAATACAAACCTCACGATGCGTCTTTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGTAA | 732 | 44.81 | MEMVAEKKDFDSAIDNNKLNSAQSVHDSSYPPSIAADETGSNNNFKEAEDLSERVARDIKDGLHPLRHKFSFWFTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCHGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDSICGAVLSIRFNEDILSVWNHNANDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRG | 243 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 46422383 | 46427313 | - | Sed0027973.1 | Sed02g0891 | 704559 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed02g0891 | 243 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 37 | 231 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Sed02g0891 | 243 | FunFam | Eukaryotic translation initiation factor NCBP | 36 | 236 | - | - | |
Sed02g0891 | 243 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 36 | 236 | IPR023398 | - | |
Sed02g0891 | 243 | MobiDBLite | consensus disorder prediction | 18 | 42 | - | - | |
Sed02g0891 | 243 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 121 | 144 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Sed02g0891 | 243 | MobiDBLite | consensus disorder prediction | 18 | 49 | - | - | |
Sed02g0891 | 243 | Pfam | Eukaryotic initiation factor 4E | 65 | 223 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Sed02g0891 | 243 | SUPERFAMILY | eIF4e-like | 42 | 239 | IPR023398 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g0891 | Sed-Chr2:46422383 | Sed08g2704 | Sed-Chr8:39011652 | 4.60E-27 | dispersed | |
Sed12g1050 | Sed-Chr12:6856684 | Sed02g0891 | Sed-Chr2:46422383 | 1.10E-117 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed02g0891 | K03259 | - | csv:101204290 | 444.891 |