Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g0933 ATGGCAGAGGAGAAAGTAGGCGAAGCCAACAGCAATGGTGGTCAGGATAAGGGGTTGAAGGGTCGAAAATCTTCATGGGCGACCCTCCGTCGTGTCGACTCGCTCAATCTCGAGGCCGGAAGATTTCCGACCGAGGTTGCTCATCAACACCCCAATGTGAATTGGCAGCGGACTCTAAGCTTGGCGTTTCAGAGCGTGGGAGTCGTATACGGCGACATCGGGACGTCCCCGTTGTACGTGTTCTCAAGCACGTTCTCAAACGGCATCGACAACACAGAGGACGTGTTAGGAGTTCTGTCGCTGATAATCTACACCATAGCGTTGCTTCCATTGTTGAAGTACGTTTTCATTGTGCTTTGGGCCAATGATAACGGCGACGGTGGAACCTTCGCTCTGTACTCGCTGTTGTGTCGGTACGTGAAGGTGGGATTGATTCCTAACGACCAGCCGGAGGACATCGAGCTCTCGAACTACCGGCTGGTCGTGCCTTCCAACTTGAGGAGGTCTCAGAAGGTGAAGGAGAAGCTGGAGAACAGCATGTTTGCAAAAATTGCTCTTTTTCTTGTCACTATTGCAGGGACTTCAATGGTTATTGGAGATGGGGTTCTCACTCCATCCATCTCAGTGCTCTCAGCAGTTAGTGGAATCAAATCACTTGGGACAGATGCTGTGGTGGGAATTTCAATAGCCATTCTTATATGCCTATTCTGCATTCAAAGATTTGGAACTGACAAAGTGGGTTTCTCATTTGCCCCAATCATCTTCGTCTGGTTCGCATTCATCGGCGGCATCGGCCTCTTCAACTTGTTCAGGCACGACATTGCCGTTCTCAAAGCTTTCAACCCTAAATATATCATCCATTACTTCAAACGAAATGGCAAGCAGGCCTGGGTCTCCCTTGGTGGGGTTTTTCTCTGCATTACAGGGACTGAGGCCATGTTTGCTGATTTGGGGCATTTTAATGTTAGAGCCATCCAGATTAGTTTCTCTTCTGTTGTATTCCCTGCTTTACTAGCAGCCTACAGTGGCCAAGCTGCATATCTAAGAAAATTCCCACAAAACGTTGGCAACACTTTCTACGACTCAATTCCAGGTCCTATGTACTGGCCAACGTTTGTAGTAGCTGTTGCAGCTTCAATCATAGCAAGCCAAGCAATGATATCAGGATCATTTGCCATAATCTCACAGTCACTCTCTCTTGGCTGCTTCCCCAGAGTAAAAGTGGTCCACACTTCACACAAGTACGAGGGCCAAGTCTACATCCCGGAAATCAACTACCTTCTCATGCTCGCCTGCATCATTGTCACTGCCGCCTTCAAGACCACCGAGAATATCGGCCACGCCTACGGCATTGCTGTCGTCTCCGTCATGATCATGACCACTGGCATGGTTGCCTTGATCATGATCGTCATTTGGAAAACCAGCATTGTGTGGATCGCTTTGTTCATCCTCGTCTTCGGCTCCATCGAGATACTCTATTTATCCTCTGTTCTCTACAAGTTCACTCAGGGCGGGTTCCTTCCTCTCGTGCTTGCGCTTTTTCTCATGTCGATTATGATGGTGTGGCATTATGTTCATAGGGAGAGGTACATTTTTGAGCTCAAGAATAAGGTATCTGCTGGCTACATTACATCGCTGGCTAGTAATCCTGAGGTTAACCGAATTCCTGGTATTGGGCTTCTCTACTCTGAGTTGGTTCAGGGGATTCCACCTATATTTCCTCACTTCATCTCTAGCATTCCCTCTGTTCATTCCGTCATCGTGTTCGTCTCCATCAAGTCGATTCCGATCAGCAAAGTTGCCCCCGGGGAGCGGTTTCTGTTTCGACAGGTGGAGCCAAGGGAGTATCGGATGTTCCGGTGTGTGGTCAGATATGGCTATAAAGACGAAATCATCGAATCCGCCAAGTTCGAGCGGCAGTTAGTAAACAGCTTAAAAGAGTTCATAAGCCGAGAACATATAATGCTGGAAGGGGTACCAGATTCATCACCAATAGAGCCACTCTCTAACCCAACTCACTCAGGCAAAATAGAGGTACTACAAAAAGTAAAGCCTTCTTCAGCAACAGTGCACGTCGAAGGAGCTCTACCAGAAGTGACAACCGGCCAGTCTCGCCGCTCGTCGGTCTCCATTCAGTCGTTCAACGGCTCGAAATCAAGAAGCTCCTCGAACGCAATCACTCAAGTGCCAGTGCCAGTGCCTGTGGGGGTGGAAGAAGAGATGGTGTTTGTAGAGAAAGCGATGACGAACGGTGTGGTGTATTTGTTGGGAGAAGCCGAGGTGGTGGCTGAACCGAAGTCGTCGTTCTTTAAGAAGATGGTGATTAATTATGCTTATAGTTTCTTGAGGAAGAACTTCAGGCAAGGGGAGAACATTCTTGAGATTCCTCACACCAGGCTTCTCAGGGTTGGAATGACTTATGAAATTTGA 2430 48.23 MAEEKVGEANSNGGQDKGLKGRKSSWATLRRVDSLNLEAGRFPTEVAHQHPNVNWQRTLSLAFQSVGVVYGDIGTSPLYVFSSTFSNGIDNTEDVLGVLSLIIYTIALLPLLKYVFIVLWANDNGDGGTFALYSLLCRYVKVGLIPNDQPEDIELSNYRLVVPSNLRRSQKVKEKLENSMFAKIALFLVTIAGTSMVIGDGVLTPSISVLSAVSGIKSLGTDAVVGISIAILICLFCIQRFGTDKVGFSFAPIIFVWFAFIGGIGLFNLFRHDIAVLKAFNPKYIIHYFKRNGKQAWVSLGGVFLCITGTEAMFADLGHFNVRAIQISFSSVVFPALLAAYSGQAAYLRKFPQNVGNTFYDSIPGPMYWPTFVVAVAASIIASQAMISGSFAIISQSLSLGCFPRVKVVHTSHKYEGQVYIPEINYLLMLACIIVTAAFKTTENIGHAYGIAVVSVMIMTTGMVALIMIVIWKTSIVWIALFILVFGSIEILYLSSVLYKFTQGGFLPLVLALFLMSIMMVWHYVHRERYIFELKNKVSAGYITSLASNPEVNRIPGIGLLYSELVQGIPPIFPHFISSIPSVHSVIVFVSIKSIPISKVAPGERFLFRQVEPREYRMFRCVVRYGYKDEIIESAKFERQLVNSLKEFISREHIMLEGVPDSSPIEPLSNPTHSGKIEVLQKVKPSSATVHVEGALPEVTTGQSRRSSVSIQSFNGSKSRSSSNAITQVPVPVPVGVEEEMVFVEKAMTNGVVYLLGEAEVVAEPKSSFFKKMVINYAYSFLRKNFRQGENILEIPHTRLLRVGMTYEI 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 46891338 46902303 - Sed0010461.1 Sed02g0933 704601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g0933 809 MobiDBLite consensus disorder prediction 1 22 - -
Sed02g0933 809 NCBIfam potassium uptake protein 61 809 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed02g0933 809 MobiDBLite consensus disorder prediction 699 725 - -
Sed02g0933 809 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 48 809 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Sed02g0933 809 MobiDBLite consensus disorder prediction 700 725 - -
Sed02g0933 809 Pfam K+ potassium transporter integral membrane domain 61 541 IPR053951 -
Sed02g0933 809 Pfam K+ potassium transporter C-terminal domain 556 809 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g0933 Sed-Chr2:46891338 Sed12g1143 Sed-Chr12:7537722 6.70E-224 dispersed
Sed02g0933 Sed-Chr2:46891338 Sed09g1218 Sed-Chr9:36426336 3.10E-221 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g0933 K03549 - csv:101205628 1232.62