Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g1150 ATGGCCGCCGCCGTCGCCGATCTGCTCATTCTCCTCTTCCTCGCCGCCGTACCCTTTTCCATTTCTCAGCCAACCGACCAAGCCCCGCCGCCCGCCGCCGCTTCCTGCAACGGAATCTTCTTGTCATACACCTTCAACCAAGGAACCAAACTTCCCCCAAATCTCACCGATCTGACCCTTCAGCCCTACCGATTCGAGTCCACTCTTTCGATTCTCAACACCGGCCTTCAGGAGCTTAAATCTTGGAGGGTTTTTGTGGGGTTTCAGCATAATGAGTTTTTAGTCTCTGCCGCCGGCGCCGTTCTCGCCGACGGGAGTACTGTTCCGGGAAACGTCGGAAATGGGTCGGTCTTTGCTGGGTTTCCGGTGACGGATTTGAAGACGGCGATTGAAACTGCTGGGGATTTGACTCAGATGCAGGTTTTGGTTAAATTGGTTGGGACCCAATTTGGGGTTGCCCCTCCTAATAGTCCTATGCCTTCCAATATTTCTCTTGTTAACGATGGATTTCTCTGCCCTAGACCTGCTCTGCGAGGAAAGAGTGAGATGCACGTCTGTTGCACACCCGATCCAGACGTTAAAACAAACATCACAACCAGTGAGGAGTTCTTGCCTCGCCAAAATGGCGATCTGACGATTATGTATGATGTGACAAGGACCTATGATTCAAGTTACTGGGCGCAAGTTACTATCTCTAACCATAATCCTCTTGGTCGTCTTGACTATTGGAAGCTAAGCTGGGATTGGATGATGGATGAATTTATCTATTCAATGAAAGGAGCTTATCCTTCTGTTGTTGATTCTACTGATTGCATTTTTGGCAGACAAGGCACTTATTATCGTGAATTAGACTTTGCCAATGTATTAAGTTGTGAAAGAAGGCCAACGATTGTTGATTTGCCTCTAACTAAGGCCAACGACAGCACTCTCGGGTTGATCCCTTTCTGCTGTCGAAACGGGACTATCTTGCCTTCTCATATGGACCCGAGCAAGTCGATTTCTGCATTTCAGATGCAAGTTTTCAAAATGCCACCAGAGCTCAATAGATCCCAGATTACACCACCTCAGAATTGGCAGATCAGCGGCATTCTCAACCCCACGTATAAATGTGGCGCTCCAGTGAGGGTAAGTTCTAGCGAATTCCCCGATGCAAGTGGTTTACCATTGAATTCGACTGCAGTAGCTAGCTGGCAGGTTGTTTGTAATATAACACACGTCAAGGATGACATGCCGAAGTGCTGTGTTTCATTTTCGGCTTTCTACAATGAATCTGTCGTCCCGTGCAGGACGTGTGCTTGTGGATGCTCGCGTAACTCTGGCCGTACATGTAATGCAACCTCCCCTGCAATGCTTCTTCCATCTGAAGCCCTTCTTGTTCCTTTTCAGAATAGGACTGCCATGGCTGTTGCTTGGGCTGGTCTTAAGCATTACCCAATTCCTAACCCGATGCCTTGTGCGGACAACTGCGGTGTGAGTATCAATTGGCATTTGAATACTGATTTTAGAGACGGATGGAGTGCGAGGATCACTCTCTTCAACTGGGATGAAGTGAATTTTGCAGATTGGTTTGCTGCAGTCGAGATGAAGAAAGCAGCACCTGGTTTCCAGGCAATGTACTCGTTCAACGCATCCACCTTGGAGCTGGATGGTTTCAATAATACTATCTTCATGCAGGGAAATCCTGGACTAAACTATCTCGTGGGCGAAACAGACGGGATCAGCCCAGGAAGGGATCCAAGGGTACCTGGAAAACAGCAATCTGTGATCTCATTTACAAAGAAGAACATACAAGGGCTTAACATAGCTGCAGGAGATGGGTTCCCCACAAAAGTGTTCTTCAATGGGGAAGAATGCCTAGTTCCAAAAATATTCCCAGTTAACGACAGCCAAAGAAACTTGGCATCGTTCATTCCGAGCATCCTCTTGCTTCTACTCGTGTTCGTTTTTATTCAGCAATAG 1959 47.63 MAAAVADLLILLFLAAVPFSISQPTDQAPPPAAASCNGIFLSYTFNQGTKLPPNLTDLTLQPYRFESTLSILNTGLQELKSWRVFVGFQHNEFLVSAAGAVLADGSTVPGNVGNGSVFAGFPVTDLKTAIETAGDLTQMQVLVKLVGTQFGVAPPNSPMPSNISLVNDGFLCPRPALRGKSEMHVCCTPDPDVKTNITTSEEFLPRQNGDLTIMYDVTRTYDSSYWAQVTISNHNPLGRLDYWKLSWDWMMDEFIYSMKGAYPSVVDSTDCIFGRQGTYYRELDFANVLSCERRPTIVDLPLTKANDSTLGLIPFCCRNGTILPSHMDPSKSISAFQMQVFKMPPELNRSQITPPQNWQISGILNPTYKCGAPVRVSSSEFPDASGLPLNSTAVASWQVVCNITHVKDDMPKCCVSFSAFYNESVVPCRTCACGCSRNSGRTCNATSPAMLLPSEALLVPFQNRTAMAVAWAGLKHYPIPNPMPCADNCGVSINWHLNTDFRDGWSARITLFNWDEVNFADWFAAVEMKKAAPGFQAMYSFNASTLELDGFNNTIFMQGNPGLNYLVGETDGISPGRDPRVPGKQQSVISFTKKNIQGLNIAAGDGFPTKVFFNGEECLVPKIFPVNDSQRNLASFIPSILLLLLVFVFIQQ 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 48663748 48667153 + Sed0027502.1 Sed02g1150 704818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g1150 652 PANTHER COBRA-LIKE PROTEIN 7 9 650 - -
Sed02g1150 652 Pfam COBRA-like protein 225 404 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g1150 Sed-Chr2:48663748 Sed07g1929 Sed-Chr7:33709873 1.30E-217 dispersed
Sed12g0793 Sed-Chr12:4865995 Sed02g1150 Sed-Chr2:48663748 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g1150 - - - 0.0