Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed02g1490 | ATGGGTAGCGGCGAGAAGATCTTCACCTTGAAGGAAGTTGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGCGGCAAGGTATATGATGTGACCAAATTCTTAGAAGACCATCCTGGTGGTGATGATGTTCTGTTATCAGCCACAGGAAAAGATGCAACCGACGATTTCGAAGATGTGGGGCACAGCGACAATGCAAGAGAAATGATGGATCAATACTATGTTGGGGAGATTGATGCTTCGACAATTCCAAAGAAGGTTGCGTACACGCCTCCAAAACAGCCTCATTACAATCAGGACAAGACGTCTGAGTTCATCATCAAGCTTCTCCAGTTCCTCGTTCCGCTCGCAATTCTGGGATTGGCAATCGCCGTACGTTTCTACACCAAACAAGCTTGA | 405 | 46.67 | MGSGEKIFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAIAVRFYTKQA | 134 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 50846964 | 50850363 | - | Sed0001171.1 | Sed02g1490 | 705158 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed02g1490 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
Sed02g1490 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 6 | 90 | IPR036400 | - | |
Sed02g1490 | 134 | Gene3D | - | 2 | 86 | IPR036400 | - | |
Sed02g1490 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Sed02g1490 | 134 | FunFam | Cytochrome b5 type B | 3 | 85 | - | - | |
Sed02g1490 | 134 | PANTHER | CYTOCHROME B5 | 5 | 132 | IPR050668 | GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Sed02g1490 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 80 | IPR001199 | - | |
Sed02g1490 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Sed02g1490 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Sed02g1490 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Sed02g1490 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Sed02g1490 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed02g1490 | Sed-Chr2:50846964 | Sed12g0390 | Sed-Chr12:2347770 | 1.80E-73 | dispersed | |
Sed02g1490 | Sed-Chr2:50846964 | Sed04g2056 | Sed-Chr4:34967221 | 1.40E-54 | wgd | |
Sed02g1490 | Sed-Chr2:50846964 | Sed05g0197 | Sed-Chr5:1203376 | 1.80E-49 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed02g1490 | K23490 | - | csv:101214209 | 274.248 |