Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g1627 ATGAAAACAACTCTAGATTCGATTTTTCATGTATCATTTGGAATTGATCTAGATAGCTTACATGGATCAAATGAAGAAATGAACAAGTTTTGTTCTGCTTTTGAAGTATCAAGTACCATGACACTTTGGCGATATGTTGATGTATTATGGCCAATCAAGAAGACTTTGAATATTGGGTCAGAAGCTACCTTAAAAGAAAACATGAAAACGGTTGATGAGTACATATATAAGCTTATCCACAACGCACTCGAACAGCGACAAGAGTTAGGCGAAGACACTTTGATGAGAAAAGATAACATCGTGTCGAGGTTTCTGCAAGCGGAGAAGACCGATCCAACGTACCTACGAGATATTATTCTTAATTTTGTCATAGCTGGAAAGGACACAACAGCAGTTACCCTTGCTTGGTTCATTTACATGCTTTGCAAGCATCCATCAGTGCAAGAAAGAGTTGCTAAAGAGATCGAGGAAGTGACAAAAGTTGAAGATGTTACCAAATTTGAAGAGTTTGCTGCAATATTGACTGAACAAGCTTTAGAAAAGATGCAGTTTCTCACTGCAACTATTAATGAAACTCTTAGACTCTATCCTGCTGTTCCAGTGGATGCCAAGATTTGCTTTTCTGATGACACACTGCCAGATGGATTCAGTGTGAGAAAAGGAGATATGGTGTCATACCAGCCATATGCAATGGGAAGGATGAAGTTCATTTGGGGCGACGATGCTGAGGAATTTCGACCGGAGAGATGGCTCGATGGAGATGGAAACTTCCAGCCTCAGAGCCCTTTCAAACTTACAACCTTTCAGGCAGGGCCACGCATTTGTCTGGGAAAAGAGTTTGCTTTGAGGCAGATCAAAATCCTGGCATCTCTATTATTGGGTTGTTTTAAGTTCAAATTGAGCGATGAGAATAAAATTGTGAAGTATCAACCGATGATTAATCTTCTTATCCATGGAGGCCTGCAAGTTTGTGCCATTCATAGACCCTCCTAA 993 40.18 MKTTLDSIFHVSFGIDLDSLHGSNEEMNKFCSAFEVSSTMTLWRYVDVLWPIKKTLNIGSEATLKENMKTVDEYIYKLIHNALEQRQELGEDTLMRKDNIVSRFLQAEKTDPTYLRDIILNFVIAGKDTTAVTLAWFIYMLCKHPSVQERVAKEIEEVTKVEDVTKFEEFAAILTEQALEKMQFLTATINETLRLYPAVPVDAKICFSDDTLPDGFSVRKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWLDGDGNFQPQSPFKLTTFQAGPRICLGKEFALRQIKILASLLLGCFKFKLSDENKIVKYQPMINLLIHGGLQVCAIHRPS 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51642719 51644690 + Sed0018532.1 Sed02g1627 705295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g1627 330 SUPERFAMILY Cytochrome P450 2 328 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS E-class P450 group I signature 114 131 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS E-class P450 group I signature 275 298 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS E-class P450 group I signature 265 275 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS E-class P450 group I signature 134 160 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS P450 superfamily signature 125 142 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS P450 superfamily signature 266 275 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS P450 superfamily signature 275 286 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PRINTS P450 superfamily signature 187 198 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 Pfam Cytochrome P450 2 312 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Sed02g1627 330 PANTHER CYTOCHROME P450 1 321 - -
Sed02g1627 330 Gene3D Cytochrome P450 1 325 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g1627 Sed-Chr2:51642719 Sed03g1893 Sed-Chr3:12891524 2.30E-66 dispersed
Sed02g1627 Sed-Chr2:51642719 Sed02g1629 Sed-Chr2:51674549 7.00E-87 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g1627 - - - 0.0