Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g1664 ATGGCATCAAGTTTGGAAGGGGCGTCAATGTCGCAAACAGATGACTTTGAAACGTTCACTCCAACGTCTGATGTTGAGCCTCTAAAGAGGGCCTGGCGTAATGAAAAGGCTGCTCCTGAGATTCTACCCTTTGAGGCATCGTTGGTTGCGAGAATTAAAGGGCAGATTCAATTAATGGAAGGAAATATAGAGGAATATTCAACAACTGGTACTGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGACCGGACACAGTTCTTATTGAGATCCTATATTAGGATTCGATTGCAGAAGATTGAGAAGTACACGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCTGAGGAAGAGATAACATTTACTGATAGGTGTATTCATGATATGAAAAAGCATTTTGATGAGAGCGTTCTATCAAAATTGCCCAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCACCACTGGACACATTTGTAGTTTGCAAAAGTAAGGAATATCTGGAACATATACAGCTTGAGGATGATGAAGAGAGAGCATCTAGTAGAATAGAAGAACCTTTTGAGATGGAGGCCAATGTGTTACACATTATTCGCTACAAGCCCATAAAATCACTTGTAGAAAGCGGAAGAATCGATTTGCTGTAG 690 39.57 MASSLEGASMSQTDDFETFTPTSDVEPLKRAWRNEKAAPEILPFEASLVARIKGQIQLMEGNIEEYSTTGTDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYTLYILKSDELFRRLSEEEITFTDRCIHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDDEERASSRIEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51899595 51904091 - Sed0009995.1 Sed02g1664 705332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g1664 229 CDD GINS_B_Sld5 168 229 IPR031633 -
Sed02g1664 229 CDD GINS_A_Sld5 24 142 IPR038749 -
Sed02g1664 229 MobiDBLite consensus disorder prediction 1 20 - -
Sed02g1664 229 MobiDBLite consensus disorder prediction 1 22 - -
Sed02g1664 229 Pfam GINS complex protein helical bundle domain 76 138 IPR021151 -
Sed02g1664 229 PANTHER SLD5 PROTEIN 9 229 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
Sed02g1664 229 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 229 IPR031633 -
Sed02g1664 229 SUPERFAMILY PriA/YqbF domain 170 229 - -
Sed02g1664 229 Gene3D - 10 219 - -
Sed02g1664 229 FunFam DNA replication complex GINS protein SLD5 9 219 - -
Sed02g1664 229 PIRSF GINS_Sld5 1 229 IPR008591 GO:0006261(InterPro)
Sed02g1664 229 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g1664 K10735 - csv:101210888 409.453