Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g1676 ATGCAATCTGGTGGGGGTGGGCCCCTCCGGAATCCGGGGTTCCCGGCCGGTCGGGCGGCATCGACATCATCAGCCGCGTCGCCATCTTCGTCGTCGTCGGCGGTGTCGACGCCGCATTTGGGGTTTGATTCAATGCAGCAGCAGCAGCAGCTGGCGTCTAGGCAGTCGCTACAACATCAATTACTCAGAAAATCTGATGGAAATGAAGCCCTTCTATCATACCAAGCGGGTGGTTTCCAAGGAGTTTTAGTTGGGAACAATTTTTCTCAGTCACCTAGTTGTTCCCCGCATTTGCCTCAGCAAGCAAGAAAATTCATTGATGTGGCTCAACAGCAGCATAGTTCTTCTCAGGAGGGCCAAAACAGGAGCCAAGGTCTTGAGCAGCAAGCACTAAATCATCCTTTGCATCAAGCTTATCTGCAATATGCCATGGCTGCTCAACAGAAGTCTGCTATGGCAATGCAATCGCAGCATCAGGCTAAAATGGGAATTATGAGCCCTCACTCTATTAAGGATCAAGATATGCGAACGGGAAATCAGAAAATTCAGGAATTTATTCCAGCCCAGGTCTCTAATCAAGCATCAACATCTTTATCTAAAAACGCATTAGATCAGTTTGCGCGCGGTGAAAAACAATTGGAGCAGGGACAGCCATCAACTTCTGATCAGAGAACTGATTCAAAATCCTCAAGCCAGCTACCTGCAATGAGCAATTTGATGCCTGTGAATATGACAAGGCCTATGCAGGCACCACAAGCTCAACATGGAATCGGTAACATGGCAAACAACCAGCTTTCCATGGCCCAGATGCAGGCGATGCAAGCATGGGCTCAAGAACGCAATATTGACCTTTCACTGCCTGCTAATGCAAACTTGATGGCCCAGCTTATTCCACTGATGCAGTCAAGAATGGTTGCTCAACAAAAACCAAATGAAAACAATATGGGATCACAGTCATCACCTGCTTCTGTCACCAAGCAGTCGATCAATTCTCCATTTTCTGGGAAAGAGGCTTCTGGTCAGGGTAATTCATTAAACGATGTATCTGGACAGTCTAGCAGCACGAAATCTAGGCAGATAACTTTACCAAGCCCCTTTAGTCAAAACATGAATGCCAGTGTTATTAGTAACACTAGTCATGGCAGCATGCAGCAGTTCGGTATTCCTGGCATGGAAAACCAGTTACCTTCCAGATTACCAGTTTCTGGTAATACAAGCACTCCAGTGCATCCTTCTGAATCAACTGGCAATGTGAACCAAAGCATTGACCATTCTATTCAAGCAAAAACATCATTAAGTAGCCCTGAGAATTTGCAAATGCAGTATGTCAGGCCGGTGAATCATTCATCTCCGCAGGCCACTCTTCCTACCAATGATGGGGGTCCTAGCAAATCAACCTTATCACAAAGTGGGCACTATAATCAGATAGCACAACAACGATTTGGGTTCACCAAACATCAATTGCATGTCTTAAAAGCTCAAATTTTAGCATTTAGGCGGATAAAGAAAGGAGAAGGTACACTGCCACAAGAACTTCTTAGGGCTATTGCTCCTCCACCCCTGGATGTGCAGCTGCAGCAACAATTTCAACCTCCAGGAGGTAGTAGTGAAGAAAAGCCATCTGGAAAGATTGTGGAAGATATTAGGAATGTGAAGGCTAGTGAAAAGGACGACTCCCTGTCTCTTGCATCGAGTAATGGACATAGATTTCCAAGAGAAGAAATCTCAACTGGAGACGAAAAATTGAAGATGCCAACTTCGGATGTGCAACCTATTCCCCTCACTATGAAGGAAACAATACCTTTGGTATCTGGTGGAAAAGAAGAGCAACAGGAAACTGTCTCTGTTAAATCAGATCAGGAAACTGATAGTGGCCCAAAGCCACATGGTAAAAGTGATTTTCCAGTAGAAAGGGGAAAGGCTATTGCAAACCAAGCTGATGTACCAGATGTTACCCAAGTTAAAAAACCTGCACCACCTAGTGCTACACCCCAGTCAAAAGACATTAGCGCTGCTAGGAAGTATCATGGACCTCTCTTTGACTTCCCATACTTCACTAGAAAGCATGACTCGTTTGGTTCTGCAATGGCACTCAATAACAATAACAACTTAACATTGGCTTATGATGTAAAAGATCTTCTTTTTGAGGAAGGTCTGGAAGTTATTGGTAAGAAAAGGACAGAGAACTTAAAGAAGATTGGTGGTTTGCTGGCTGTCAACTTAGAGCGGAAAAGAATCCATCCTGATTTGGTAGTACGCTTACAGATTGAAGAAAAGAAGCTTCGACTTCTAGATCTACAGGCACGTCTAAGGGAAGAAATTGATCAACAACAGCAAGAGATAATGGCAATGCAGGATAGGCCTTATAGGAAGTTTGTGCGTTTATGTGAGCGACAACGTATAGAGCTAACTCGACAAGTACAAGCCTCTCAGAAAGCCATGAGAGAAAAGCAACTGAAATCTGTCTTTTTGTGGCGCAAAAAACTTCTAGAGGCTCACTGGGCCATCCGTGATGCTCGGACTGCACGAAACAGAGGAGTTGCTAAATATCATGAGAAAATGTTGAGGGAGTTCTCCAAAAGAAAAGATGATGATAGAAACAAAAGGATGGAAGCTTTAAAGAATAATGATGTTGAAAGATATAGAGAAATGTTGTTGGAGCAGCAGACGAGCATGCCTGGTGATGCTGCTGAGAGATATTCTGTTCTCTCATCATTTTTGACTCAGACCGAAGAATATCTATATAAGCTAGGAGGCAAAATAACTGCTGCCAAGAGTCAGCAGGAAGTGGCAGAGGCTGCAAATGTTGCTGCAGCTGCTGCCCGATTGCAGGGTCTTTCAGAAGAAGAAGTTAGGGCAGCAGCTGCTTGTGCAGGAGAGGAGGTTATGATCAGAAACCGTTTTATGGAAATGAATGCTCCCAAGGATAGTTCATATGTTAACAAGTACTATAACCTTGCTCATGCTGTGAATGAGAGAATTGTAAGGCAACCGTCAATGTTGCGGGCTGGAACTTTAAGGGACTATCAGCTTGTTGGATTGCAATGGATGCTTTCACTATATAACAATAAATTAAATGGAATTTTGGCGGATGAGATGGGTCTTGGAAAGACAGTGCAGGTAATGGCATTGATTGCGTATTTGATGGAATTTAAGGGGAACTATGGCCCGCATCTTATAATTGTCCCTAATGCTGTTTTGGTCAATTGGAAGAGTGAGCTTCATACTTGGCTACCATCCGTGTCATGCATTTATTATGTTGGTGGGAAGGATGAGCGGTCAAAATTATTTTCACAAGAGGTTTGTGCCTTGAAATTTAACGTTCTCGTGACTACTTATGAGTTTATCATGTATGACCGCTCAAAACTTTCAAAAATTGATTGGAAGTATATTGTAATTGATGAAGCACAAAGAATGAAGGATAGGGAATCAGTTCTAGCTCGTGACCTTGATAGGTACAGATGCCAGAGGCGCTTGCTCCTAACTGGGACACCATTACAGAATGATTTGAAGGAACTTTGGTCGCTGCTTAATCTGCTTCTTCCAGAAGTGTTTGATAATCGAAAAGCTTTTCATGATTGGTTCTCGAAACCCTTTCAGAGGGAAGGCCCCATGCAGAATACAGAAGATTATTGGCTTGAGACTGAGAAAAAAATTATTGTAATTCACCGACTTCACCAAATTCTTGAGCCTTTTATGCTCCGTCGTCGTGTGGAAGATGTTGAAGGATCACTTCCACCAAAGGTTTCCATAGTGTTGAGGTGCAGGATGTCATCCTTTCAGAGTGCTATTTATGACTGGATTAAGTCCACTGGTACTCTTCGTGTTGATCCGGAAGAAGAGAAACTCAGGGTTCAAAAAAATCCGAATTACCAGACTAAGGTCTATAAAACATTGAATAACAGATGTATGGAACTAAGGAAAACTTGTAACCACCCTTTGCTTAACTATCCATATTATGGTGACTTCTCCAAAGACTTCCTGGTAAGATCGTGTGGAAAACTGTGGATCCTGGATAGGATCCTTATAAAACTTGAGAAGGCAGGACATAGAGTACTGCTTTTTAGTACAATGACAAAACTACTTGATATATTAGAGGAACACTTGCAATGGCGGCGACTCATATATAGAAGAATTGATGGAACAACTAGTTTAGAGGATCGTGAATCTGCCATAGTGGATTTCAATAGTCCTGGCTCAGACTGTTTTATATTCTTGCTGAGTATACGTGCAGCTGGTCGTGGTCTTAATCTTCAGTCTGCTGACACAGTTATTATTTATGACCCTGATCCCAACCCAAAAAATGAGGAACAAGCGGTTGCTAGAGCCCACCGTATTGGACAGACAAGAGAAGTCAAAGTCATCTACATGGAAGCAGTGGTTGGGAAAATATCTAGTCATCAGAAAGAAGATGAGCTAAGAAGTGGTGGGTCAGGTGATTTAGAAGATGATTTTGCTGGTAAGGATCGATACATGGGATCTATTGAGAGTCTTATACGAAATAACATTCAACAATATAAGATAGAAATGGCAGATGAGGTCATCAATGCTGGGCGTTTTGACCAGAGAACAACGCATGAAGAAAGGCGCTTGACTCTAGAGACATTGTTGCACGACGAAGAACGATATCAAGAAACTGTTCATGATGTACCTTCGCTTCAGGAGGTTAATCGAATGATTGCTAGAAGTGAAGATGAGGTCGAGCTGTTTGACCAAATGGATGAAGAACTTGATTGGACGGAGGAAATGACAAGCTATGATCAGGTACCTAGGTGGCTTCGAGCAAGTACAAGGGAAGTGAATAATGCTATTGCTAATTTATCAAAGAAACCTTCAAAAAATATTTTGTCTAGTGGTGGTTATGGCTTGGAATCTAGCGAACTTGGCTCTGATTCATCTCTCAGAACTGAAAGAAAGAGGGGCCGTCCTAAGGGTAAAAAGATTCCCAATTACAAGGAAATGGAGGATGATAATGGAGAGTTCTCGGAAGCAAGTTCTGATGAGAGAAATGGGTACTCCATCCAGGAAGAAGAGGGAGAAATTGCCGAGTTTGAAGATGATGAATTTAGTAGGGGTATTGAGGTGACACAACTTAACAAGGATCAGATAGAAGATGGTCCATCTTCTGATGCTATCTATGATTATCCTCGGGCTTCTGAAATCACTAGAAATAATCATTTGCTCGAAGAAGCTGGGTCTTCAGGCTCCTCTTCCAGTAGTCGAAGATTGACACAGCTGGTGTCTCCTGTTTCTTCTCAGAAATTTGGCTTCTTATCTGCCTTGGATGCCAGGCCTAGTTCCCTTTCAAAGAGACTGCCAGATGACCTAGAAGAAGGGGAAATTGCAATATCTGGCGATTCTCACTTGGAGAACCAACAATCAGAAAGTTGGATTCATGATCGTGATGATGGGGAAGAGGAACAAGTACTGCAGCCCAAGATAAAACGAAAAAGGAGTCTTAGGCTTAGGCCACGTCCTCCTGCAGAAAGGCGAGAAGAGAAGATATATAATGAAACCCAATCTCTTCAATATGGAGGTTCTTCATCTCCTTCTCCTTTTCTAGCAGAACATAAAACTACCAAATTTAAGAATGATCATGAGGCTAAACCATATGGAGGTTCATTGAAGCATGAGCAAAGTGAGTCGTCTTCAAAGACTCGGCGTAATTTGCCTGCTAGAAGGACGACTCCTACATCAAAGTTGCACTCTTCTCCTAAATCTAGCAGATTGAATTCATTGACTGGATATGCGGAAGAGGCCGTTGAACACTCTAGAGAAAGCGTAGATGGTAAACCATTGAATGCTGGTGGAAGTTCAGCTTTTGATTCTAAGATGCCTGACATAATCCAGAGGAGGTGCAAGAATGTTATTAGCAAGCTTCAGAGTAAAATAGACAAAGAAGGGCATCAAATTGTGCCGTTGCTAACAGATTTGTGGAAACGGATCGAAAACTCTAGTTTACCAAGTGGAGTTACTAATAATATTTTGGATATTCGGAAGATTGATCAACGCATAGACAGATTAGAGTACAACGGAGTTATGGAGTTGGTGTTTGATGTTCAGTTTATGTTGAAGGGTGCTATGCAGTTTTATGGGTTCTCATCCGAGGTAAGATTTGAGGCAAGAAAAGTGCATGACCTCTTTTTCGATATTCTAAAGATTGCATTTCCGGACACAGATTTCCGAGAAGCTCGGAACGCTCTATCTTTCTCTAGCCCAGGATCTTCTACTGCTGCTTCTTTGAGGGAGAGACCTGCTAGCCAAACCAAAAGACATAAGATTATAAATGATATGGACACGGACTCGTGCCCGCCACAGAAGTCGCAGCACCAGCGTGGACCTATGTCGGGGGAAGAAACAAGGGCCACCAGAGGTCACTTGTTGACACAAAAGGAATCAAGATTTGGCAGTGGTAGTGGAAGTAAGGATCAATATCCAATGGAAGAACCCCCACTTCTTACTCATCCTGGGGAACTGGTTATCTGCAAGAAGAAAAGAAAAGACAGGGAAAAATCAATAATCAAACCAAGGACGGGATCCGGTGGCCCGGTCTCGCCGCCTAGCGTTGCTCGTGGCATTAGAACTCCAGGTCCGGGGTCAGTTTCAAAAGACAGCAAACAATCCCAAGGGTGGCCCAACCAGCCTCAATCTGCCAACGTTGGTGGTGGACCTGTTAGTTGGGCAAATCCTGTGAAGAGATTAAGAACAGATTCTGGAAAGAGGAGGCCCAGCCATATCTGA 6741 43.18 MQSGGGGPLRNPGFPAGRAASTSSAASPSSSSSAVSTPHLGFDSMQQQQQLASRQSLQHQLLRKSDGNEALLSYQAGGFQGVLVGNNFSQSPSCSPHLPQQARKFIDVAQQQHSSSQEGQNRSQGLEQQALNHPLHQAYLQYAMAAQQKSAMAMQSQHQAKMGIMSPHSIKDQDMRTGNQKIQEFIPAQVSNQASTSLSKNALDQFARGEKQLEQGQPSTSDQRTDSKSSSQLPAMSNLMPVNMTRPMQAPQAQHGIGNMANNQLSMAQMQAMQAWAQERNIDLSLPANANLMAQLIPLMQSRMVAQQKPNENNMGSQSSPASVTKQSINSPFSGKEASGQGNSLNDVSGQSSSTKSRQITLPSPFSQNMNASVISNTSHGSMQQFGIPGMENQLPSRLPVSGNTSTPVHPSESTGNVNQSIDHSIQAKTSLSSPENLQMQYVRPVNHSSPQATLPTNDGGPSKSTLSQSGHYNQIAQQRFGFTKHQLHVLKAQILAFRRIKKGEGTLPQELLRAIAPPPLDVQLQQQFQPPGGSSEEKPSGKIVEDIRNVKASEKDDSLSLASSNGHRFPREEISTGDEKLKMPTSDVQPIPLTMKETIPLVSGGKEEQQETVSVKSDQETDSGPKPHGKSDFPVERGKAIANQADVPDVTQVKKPAPPSATPQSKDISAARKYHGPLFDFPYFTRKHDSFGSAMALNNNNNLTLAYDVKDLLFEEGLEVIGKKRTENLKKIGGLLAVNLERKRIHPDLVVRLQIEEKKLRLLDLQARLREEIDQQQQEIMAMQDRPYRKFVRLCERQRIELTRQVQASQKAMREKQLKSVFLWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSMPGDAAERYSVLSSFLTQTEEYLYKLGGKITAAKSQQEVAEAANVAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDSSYVNKYYNLAHAVNERIVRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGGKDERSKLFSQEVCALKFNVLVTTYEFIMYDRSKLSKIDWKYIVIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQREGPMQNTEDYWLETEKKIIVIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSSFQSAIYDWIKSTGTLRVDPEEEKLRVQKNPNYQTKVYKTLNNRCMELRKTCNHPLLNYPYYGDFSKDFLVRSCGKLWILDRILIKLEKAGHRVLLFSTMTKLLDILEEHLQWRRLIYRRIDGTTSLEDRESAIVDFNSPGSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVGKISSHQKEDELRSGGSGDLEDDFAGKDRYMGSIESLIRNNIQQYKIEMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMDEELDWTEEMTSYDQVPRWLRASTREVNNAIANLSKKPSKNILSSGGYGLESSELGSDSSLRTERKRGRPKGKKIPNYKEMEDDNGEFSEASSDERNGYSIQEEEGEIAEFEDDEFSRGIEVTQLNKDQIEDGPSSDAIYDYPRASEITRNNHLLEEAGSSGSSSSSRRLTQLVSPVSSQKFGFLSALDARPSSLSKRLPDDLEEGEIAISGDSHLENQQSESWIHDRDDGEEEQVLQPKIKRKRSLRLRPRPPAERREEKIYNETQSLQYGGSSSPSPFLAEHKTTKFKNDHEAKPYGGSLKHEQSESSSKTRRNLPARRTTPTSKLHSSPKSSRLNSLTGYAEEAVEHSRESVDGKPLNAGGSSAFDSKMPDIIQRRCKNVISKLQSKIDKEGHQIVPLLTDLWKRIENSSLPSGVTNNILDIRKIDQRIDRLEYNGVMELVFDVQFMLKGAMQFYGFSSEVRFEARKVHDLFFDILKIAFPDTDFREARNALSFSSPGSSTAASLRERPASQTKRHKIINDMDTDSCPPQKSQHQRGPMSGEETRATRGHLLTQKESRFGSGSGSKDQYPMEEPPLLTHPGELVICKKKRKDREKSIIKPRTGSGGPVSPPSVARGIRTPGPGSVSKDSKQSQGWPNQPQSANVGGGPVSWANPVKRLRTDSGKRRPSHI 2246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51924358 51935780 - Sed0000619.1 Sed02g1676 705344

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g1676 2246 MobiDBLite consensus disorder prediction 1838 1855 - -
Sed02g1676 2246 Pfam SNF2-related domain 1009 1313 IPR000330 GO:0005524(InterPro)|GO:0140658(InterPro)
Sed02g1676 2246 SMART bromo_6 1942 2057 IPR001487 GO:0005515(InterPro)
Sed02g1676 2246 SUPERFAMILY Bromodomain 1996 2055 IPR036427 GO:0005515(InterPro)
Sed02g1676 2246 MobiDBLite consensus disorder prediction 1793 1814 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 1611 1673 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 612 636 - -
Sed02g1676 2246 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1018 1183 IPR014001 -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 1 39 - -
Sed02g1676 2246 FunFam ATP-dependent helicase BRM 1246 1456 - -
Sed02g1676 2246 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1337 1514 IPR001650 -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 1858 1888 - -
Sed02g1676 2246 SMART QLQ_2 481 518 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Sed02g1676 2246 PANTHER SNF2/RAD54 HELICASE FAMILY 624 1631 - GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0008094(PANTHER)|GO:0045944(PANTHER)
Sed02g1676 2246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 991 1236 IPR027417 -
Sed02g1676 2246 SMART ultradead3 1002 1191 IPR014001 -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 212 237 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 1889 1914 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 2069 2246 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 2200 2223 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 310 420 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 211 237 - -
Sed02g1676 2246 ProSiteProfiles QLQ domain profile. 482 518 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Sed02g1676 2246 MobiDBLite consensus disorder prediction 525 544 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 555 668 - -
Sed02g1676 2246 Gene3D - 997 1245 IPR038718 -
Sed02g1676 2246 Coils Coil 756 787 - -
Sed02g1676 2246 FunFam ATP-dependent helicase BRM 997 1245 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 2159 2175 - -
Sed02g1676 2246 SMART helicmild6 1363 1447 IPR001650 -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 448 469 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 2069 2084 - -
Sed02g1676 2246 Pfam Helicase conserved C-terminal domain 1334 1447 IPR001650 -
Sed02g1676 2246 Gene3D - 807 881 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 1783 1939 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 2101 2116 - -
Sed02g1676 2246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1240 1577 IPR027417 -
Sed02g1676 2246 CDD SF2_C_SNF 1332 1457 IPR049730 -
Sed02g1676 2246 Gene3D - 1941 2054 IPR036427 GO:0005515(InterPro)
Sed02g1676 2246 Pfam QLQ 483 516 IPR014978 GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)
Sed02g1676 2246 Gene3D - 1246 1456 IPR027417 -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 1611 1630 - -
Sed02g1676 2246 MobiDBLite consensus disorder prediction 17 39 - -
Sed02g1676 2246 FunFam Brahma1 1944 2067 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g1676 K11647 - - csv:101221426 3742.58
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g1676 Sed-Chr2:51924358 Sed04g1883 Sed-Chr4:33513160 1.00E-136 dispersed
Sed12g0151 Sed-Chr12:871798 Sed02g1676 Sed-Chr2:51924358 0.00E+00 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g371 . . . . . Bpe14g01153 . . . . Cma06g01457 Cma14g01649 Car06g01259 Car14g01483 Sed02g1676 Cpe08g00220 Cpe03g01393 Bhi01g00925 Tan10g0941 Cmetu06g0809 . Hepe05g1489 . Lcy11g1461 . . . . . . . Cone14ag0789 Cone15ag0790 . . Lsi05g01493 . . Cme06g00682 Blo02g00553 . . . . . Bma02g00714 . . Cmo06g01459 Cmo14g01693 . . . . . . . . . . . . . Cla05g00609 Cam05g0669 Cec05g0679 Cco05g0673 Clacu05g0664 Cmu05g0632 Cre05g0702 . Csa03g01407 Chy06g00650 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007868 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
37675 PF00176 SNF2_N 1.40E-65 CL0023 Sed TR