Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed02g1783 ATGGCTTCGGATCCCAAGGTTTTCGTGTTCGATGAAGTTGCTAAGCACAATCACCGGCGGGATTGTTGGCTTATCATCTCTGGAAAGGTATATGATGTCACCCCGTTTCTGGATGAACATCCCGGAGGTGATGAAGTCTTGGTATTAGCTGCTGAAAAAGATGCAACAGAAGATTTTGAAAATGTGGGTCACAGTGTATCTGCAATAGAGCAAATGGAAAAGTATTACATTGGCAATGTTGACATGGCTACCGTTCCAAAGCCGATCGATTACCGACCCCCTGCATCTCAATCTGCTACAACACCTGAATCTGCAGAATCTTTGCTAAAAGTACTGCAATTTCTGGTTCCCTTGCTGATTTTAGGTGTTGCACTTTATCTGCAATACTATAGCAAAAAACAGTAA 405 42.72 MASDPKVFVFDEVAKHNHRRDCWLIISGKVYDVTPFLDEHPGGDEVLVLAAEKDATEDFENVGHSVSAIEQMEKYYIGNVDMATVPKPIDYRPPASQSATTPESAESLLKVLQFLVPLLILGVALYLQYYSKKQ 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 52493553 52494320 + Sed0007924.1 Sed02g1783 705451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed02g1783 134 Gene3D - 2 83 IPR036400 -
Sed02g1783 134 FunFam Cytochrome b5 type B 2 85 - -
Sed02g1783 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 94 IPR036400 -
Sed02g1783 134 PANTHER CYTOCHROME B5 5 131 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Sed02g1783 134 SMART Cyt_b5_2 8 81 IPR001199 -
Sed02g1783 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Sed02g1783 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Sed02g1783 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Sed02g1783 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Sed02g1783 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Sed02g1783 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Sed02g1783 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed02g1783 Sed-Chr2:52493553 Sed12g0390 Sed-Chr12:2347770 8.40E-39 dispersed
Sed12g0066 Sed-Chr12:380413 Sed02g1783 Sed-Chr2:52493553 1.50E-55 wgd
Sed02g1783 Sed-Chr2:52493553 Sed05g0385 Sed-Chr5:2623399 7.10E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed02g1783 K23490 - csv:101205000 206.068