Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0043 ATGGCTAGGAGGGCCCTGCGTGCATTAAGAGGGTTGGTGAGGTTGAAGACGCTGATACGACAAGGCCAATCTGTGAAAAGACAAGCGACAACCACATTAAGATGCATGCAGACTCTTGCTCGTGTGCAATCACAGATTCGTGCAAGAAGAAATAGAATGTCAGAGGAGAATCAAGCTCTTCACAGGCAGCTCCAACAAAAACATGAAAGAGAGCTTGAGAGATTAACTGCTTCTGCAAGCAATGAATGGGATGACAGTACCAAATCGAAGGAGGAAGTTGAAGCAAGATTAGTTTACAGGCAAGAAGCAACAACAAGAAGAGAAAGGGCGTTGGCGTATGCTTACTCTCATCAGAATTTATGGACGAATTCTTCAAAATCCGCAAACCCTACATTCATGGACTCGAACAATCCACGCTGGGGCTGGAGCTGGTTAGAGCGATGGATGGCCTCTCGTCCATGGGAGACCAGAAGCACCTTCGATTCTCATGAGCGTGGCTCTGTCAAGAGCGCCATCAGCCACGCAACCTGGATCGGAGACATTTCCAAATCTTACGCCCGTCGTGATCTCAATCTCGACATCAAGCCTTTTCCAATGACTCCGACGAGCCGAGCTCCGAGTCGCCAATCGCCAGCGTCCCTATCTGCAGGGAGGAAATTGAAGCCGGCGAGTCCAAGAGGGTTCGGATGGGGCGGAGACGGGGATTCCAGAAGCGGATTGAGCGTGAAATCGGAGCGATACCAGCGACATAGCATCGCGGGATCATCGGTGCATGAGGAGGAAAGCTTCACGAGTTCGTCGTCGGTTCCAAGCTACATGGCGTCCACGGAAGCGGCTAGGGCTAGGTCCCGGCTGTCGAGTCCGATGGGATCAGAGACTCGGGAGAAAGGAGCGACGAGTGGCAGCGTAAAGAAGCGGCTCTCGTTCCCTGCCTCGCCGACGGCGGTGGCGGCGAGGAGACAATCTGGCGAGAGCAGATAG 981 53.11 MARRALRALRGLVRLKTLIRQGQSVKRQATTTLRCMQTLARVQSQIRARRNRMSEENQALHRQLQQKHERELERLTASASNEWDDSTKSKEEVEARLVYRQEATTRRERALAYAYSHQNLWTNSSKSANPTFMDSNNPRWGWSWLERWMASRPWETRSTFDSHERGSVKSAISHATWIGDISKSYARRDLNLDIKPFPMTPTSRAPSRQSPASLSAGRKLKPASPRGFGWGGDGDSRSGLSVKSERYQRHSIAGSSVHEEESFTSSSSVPSYMASTEAARARSRLSSPMGSETREKGATSGSVKKRLSFPASPTAVAARRQSGESR 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 290565 294488 + Sed0014791.4 Sed03g0043 705530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0043 326 PANTHER IQ-DOMAIN 5-RELATED 1 294 - -
Sed03g0043 326 Pfam Protein of unknown function (DUF4005) 254 316 IPR025064 -
Sed03g0043 326 MobiDBLite consensus disorder prediction 257 297 - -
Sed03g0043 326 MobiDBLite consensus disorder prediction 196 326 - -
Sed03g0043 326 Coils Coil 50 70 - -
Sed03g0043 326 MobiDBLite consensus disorder prediction 50 70 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed03g0041 Sed-Chr3:290565 Sed03g0043 Sed-Chr3:290565 1.80E-175 dispersed
Sed03g0043 Sed-Chr3:290565 Sed04g2615 Sed-Chr4:38598647 2.50E-68 dispersed
Sed03g0042 Sed-Chr3:290565 Sed03g0043 Sed-Chr3:290565 8.50E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0043 - - - 0.0