Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sed03g0105 | ATGCATGGCATTCTCGGCGCCAATTCTTTGATTATCGCCGAAGGTGACACCCACCGGAAGCTTAGAAACGTCGTTGTTAGCTTCATCAGCTGGTGCAAGTCCAGACCCTCTTTTCTTCATTGCGTGGATAAGCTCTCTGTCTCTTTGATGGACTCATGGAGATCACAAACCCAAGTGCTTTTCAGCAAAGAACTCAAAATGTTTGCTTTGAGTGTTATGGTGAAAGAACTGCTCAGCATCGAAGCGAACGAGTCGATAGGGTCAACGATATTAGAAGAGTTCGAGACGTATATGAAAGGATTTGTCTCCTTGCCTCTAAACCTGCCTAGAACTCCATACTCTAATGCGGTCAAGGCTAGGAGGAGGCTATCTTGCATTGTGAAAGAGATGATGAGAGAGAGGAGAAGAAAATTAGTGATGGGGATGGAAATGGAAATGGAAGGGGCTAATGAGAACTTTCTAGAAGTGATAATGTCAAATTGGAAGCTTGAGGATGAAGAGATTGTGAGTGTTGTGTTGGACATATTGCTTGGAGGTTATGAGACAACAGCCACCCTCATGGGATTGATTGTCTATTTTCTTGCAAATTCACCACCTAATATTCTTGCAAAATTAAAGGAAGAACATGAAACCATAAGAATTGGTAAAAGGAATGGAGAATGTCTCAATTTGGAAGATTACAAGCAAATGGAGTTCACATGCAATGTGATATATGAAGCCATGAGATGTGGGAATGTGGTCAAGTTTTTACATAGGGAAGCTCTTAAAGATGTCAAATTCAAAGATATTGTCATACCCTCTGGATGGAAAGTTCATCCAATTTTCTCAGCAGTTCATCTTGATCCAGCCCTTCATCCAAATCCTCATCAATTCAATCCTTGGAGATGGACGGATGACAAAGAAATGAGCAAAAAAGTGACACCATTTGGTGGAGGGCCAAGGCTTTGTCCAGGGGTTGAGCTTGCCAAACTAGAGATTGCTTTCTTCCTCCATCATCTTGTCCTTAATTATAAGTGGAAGACAAGAGCTGATGAATGTCCACTAGCCTACCCATATGTTAAATTTAAAGGAGACTTGCTCCTTGAGATTGAGCTCTGCTGTTGA | 1104 | 41.76 | MHGILGANSLIIAEGDTHRKLRNVVVSFISWCKSRPSFLHCVDKLSVSLMDSWRSQTQVLFSKELKMFALSVMVKELLSIEANESIGSTILEEFETYMKGFVSLPLNLPRTPYSNAVKARRRLSCIVKEMMRERRRKLVMGMEMEMEGANENFLEVIMSNWKLEDEEIVSVVLDILLGGYETTATLMGLIVYFLANSPPNILAKLKEEHETIRIGKRNGECLNLEDYKQMEFTCNVIYEAMRCGNVVKFLHREALKDVKFKDIVIPSGWKVHPIFSAVHLDPALHPNPHQFNPWRWTDDKEMSKKVTPFGGGPRLCPGVELAKLEIAFFLHHLVLNYKWKTRADECPLAYPYVKFKGDLLLEIELCC | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 637283 | 641224 | + | Sed0018863.2 | Sed03g0105 | 705592 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sed03g0105 | 367 | PRINTS | P450 superfamily signature | 307 | 316 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | PRINTS | P450 superfamily signature | 316 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | PRINTS | P450 superfamily signature | 178 | 195 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | PRINTS | P450 superfamily signature | 235 | 246 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | Pfam | Cytochrome P450 | 9 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | Gene3D | Cytochrome P450 | 1 | 357 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 309 | 318 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Sed03g0105 | 367 | SUPERFAMILY | Cytochrome P450 | 5 | 346 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | PRINTS | E-class P450 group I signature | 274 | 298 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | PRINTS | E-class P450 group I signature | 167 | 184 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | PRINTS | E-class P450 group I signature | 306 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | PRINTS | E-class P450 group I signature | 316 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Sed03g0105 | 367 | PANTHER | CYTOCHROME P450 26 | 2 | 337 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Sed03g0105 | Sed-Chr3:637283 | Sed07g1699 | Sed-Chr7:15411770 | 2.90E-73 | dispersed | |
Sed03g0104 | Sed-Chr3:637283 | Sed03g0105 | Sed-Chr3:637283 | 9.00E-216 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sed03g0105 | K12639 | - | csv:101215045 | 570.852 |