Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sed03g0150 ATGTCACAAGGCTTTGCGATCGAGCTCTATTTCGACCCTGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTATTAGCTCGCCGCCAAATTAGTACCCAACTCATCGAAATTGAATCACGCCCTCACATTACCCTCTTCTCCAGCCCTTTTCTCGAACCCTCAAAAGTTGAATCCATTGTGAAGAATTTGGCTTCGAAACAGGAGCCTTTGCCTTTGTCCTTGTCGGCCATTGGCAGCCTTCCCAGTGATAGCAACGTTCTCTTCCTCGGTCCGCCGCCTTCGATTTCGCTCCTCCAATTCCAGTCCCAATTGTGTGAAGCAATGAGGAAGGAAGGAATCGAAATCGGGGAGGATTATCGCCTCGGCTCGTGGATTCCCCATTGTGCTGTTGCTCAGGAGGTGCCCAAGGCTCGAATGGCGGAGGCATTTTGTGTTCTGAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTAGGGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTTGAAGCTTGA 552 48.91 MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPSKVESIVKNLASKQEPLPLSLSAIGSLPSDSNVLFLGPPPSISLLQFQSQLCEAMRKEGIEIGEDYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 936850 938212 + Sed0001363.1 Sed03g0150 705637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sed03g0150 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Sed03g0150 183 SUPERFAMILY LigT-like 5 155 IPR009097 -
Sed03g0150 183 Pfam 2'-5' RNA ligase superfamily 40 164 - -
Sed03g0150 183 PANTHER - 1 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Sed11g1947 Sed-Chr11:33790629 Sed03g0150 Sed-Chr3:936850 3.90E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sed03g0150 - - - 0.0